Job Description A0AVF1 Confidence 97.06% Date Sat Jun 16 10:27:57 BST 2012 Rank 127 Aligned Residues 246 % Identity 12% Template c3eiqC_ PDB info PDB header:hydrolase/antitumor protein Chain: C: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of pdcd4-eif4a Resolution 3.50 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	N	L	K	A	C	N	H	F	R	L	Y	N	G	R	A	A	E	A	E	L	K	S	L	M	D	N	A	S	S	S	F	E	F	A	K	E	L	I	R	H	N	L	V	V	F	R	G	G	E	G	A	L	Q	V	L	P	P	L	V	D	V	I	P	E	A	R	L	N	L	V	I	Y	Y	L	R	Q	D
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		K	T	L	T	P	I	I	Q	E	Y	F	E	H	G	D	T	N	E	V	A	E	M	L	R	D	L	N	L	G	E	M	K	S	G	V	P	V	L	A	V	S	L	A	L	E	G	K	A	S	H	R	E	M	T	S	K	L	L	S	D	L	C	G	.	T	V	M	S	T	N	D	V	E	K	S	F	D	K	L	L
Template Known Secondary structure																										T	T	T			G	G	G	G	G										T	T	S														T	T	T	T	.	T	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		300	.	.	.									.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																																												.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																																																												.	.	.	.
Query Sequence		D	V	Q	E	.	.	.	.	.	.	.	.	A	Y	N	L	I	K	D	L	E	P	T	T	P	Q	E	Y	I	L	K	G	V	V	N	A	A	L	G	Q	E	M	G	S	R	D	H	M	K	I	A	Q	Q	F	F	Q	L	V	G	G	S	A	S	E	C	D	T	I	P	G	R	.	.	.	.	Q	C	M	A	S
Query Conservation						.	.	.	.	.	.	.	.																																																												.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																																												.	.	.	.
Template Conservation
Template Sequence		K	D	L	P	E	L	A	L	D	T	P	R	A	P	Q	L	V	G	Q	F	I	A	R	A	V	G	D	G	I	L	C	N	T	Y	I	D	S	Y	K	D	C	V	Q	A	R	A	A	L	D	K	A	T	V	L	L	S	M	V	W	G	S	G	G	G	Q	Q	P	V	N	H	L	V	K	E	I	D	M	L	L	K
Template Known Secondary structure			T									T	T															T	T		S		S	S	T	T	G	G	G																		T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		C	F	F	L	L	K	Q	F	D	D	V	L	I	Y	L	N	S	F	K	S	Y	F	Y	N	D	D	I	F	N	F	N	Y	A	Q	A	K	A	A	T	G	N	T	S	E	.	.	G	E	E	A	F	L	L	I	Q	S	E	K	M	K	N	D	Y	I	Y	L	S	W	L	A	R	C	Y	I	M	N	K	K	P	R
Query Conservation																																														.	.
Alig confidence																																														.	.																																		.
Template Conservation																																																																																	.
Template Sequence		E	Y	L	L	S	G	D	I	S	E	A	E	H	C	L	K	E	L	E	V	P	H	F	H	H	E	L	V	Y	E	A	I	V	M	V	L	E	S	T	G	E	S	A	F	K	M	I	L	D	L	L	K	S	L	W	K	S	S	T	I	T	I	D	Q	M	K	R	G	Y	E	R	I	Y	N	E	I	P	D	I	.
Template Known Secondary structure																						T	T																		S	S																T	T		S																				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	E	L	Y	L	K	M	E	T	S	G	E	S	F	S	L	L	Q	L	I	A	N	D	C	Y	K	M	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	N	L	D	V	P	H	S	Y	S	V	L	E	R	F	V	E	E	C	F	Q	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.					T	T																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions