Job Description A0AVF1 Confidence 99.43% Date Sat Jun 16 10:27:57 BST 2012 Rank 97 Aligned Residues 211 % Identity 20% Template c3ceqB_ PDB info PDB header:motor protein, transport protein Chain: B: PDB Molecule:kinesin light chain 2; PDBTitle: the tpr domain of human kinesin light chain 2 (hklc2) Resolution 2.75 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																						.	.	.	.	.	.	.	.
Query SS confidence																	.																																						.	.	.	.	.	.	.	.
Query Sequence		F	T	G	A	I	T	L	L	E	F	K	R	H	V	G	.	E	E	E	E	D	T	N	L	W	I	G	Y	C	A	F	H	L	G	D	Y	K	R	A	L	E	E	Y	E	N	A	T	K	E	E	N	C	N	.	.	.	.	.	.	.	.	S	E	V	W	V	N	L	A	C	T	Y	F	F	L	G	M	Y	K	Q
Query Conservation																	.																																						.	.	.	.	.	.	.	.
Alig confidence																	.																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	E	A	A	H	L	L	N	D	A	L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R	G	K	Y	K	E
Template Known Secondary structure															S	S	S																	T	T																						T	T																			T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		110	.	.	.	.	.	.	.	.	.	120	.	.	.														.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	A	G	F	K	A	S	K	S	R	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	L	L	F	H	L	A	H	K	F	N	D	E	K	K	L	M	S	F	H	Q	N	L	.	.	.	.	.	.	.	.	.	.	.	Q	D	V	T	E	D	Q	L	S	L	A	S	I	H	Y	M	R	S
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	F	H	P	D	V	A	K	Q	L	S	N	L	A	L	L	C	Q	N	Q	G	K	A	E	E	V	E	Y	Y	Y	R	R	A	L	E	I	Y	A	T	R	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L	K	Q	G
Template Known Secondary structure																			T	T																	T	T	T																				S		T	T																			T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180																.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	Q	E	A	I	D	I	Y	K	R	I	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	E	Y	L	A	L	N	V	Y	V	A	L	C	Y	Y	K	L	D	Y	Y	D	V	S	Q	E	V	L	A	V	Y	L	Q	Q	I	P	D	S	T	I	A	L	N	L	K	A	C	N	H	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	Q	D	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	K	E	F	G	S	V	N	G	D	N	K	P	I	W	M	H	A	E	E	R	E	E	S	K	D	K	R	R	D	S	A	P	Y	G	E	Y	G	S	W	Y	K	A	C	K	V	D	S	P	T	V	N	T	T	L	R	S	L	G	A	L	Y	R
Template Known Secondary structure																								S			S	S	S													T	T					S	S	S		S	S	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Y	N	G	R	A	A	E	A	E	L	K	S	L	M	D	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	G	K	L	E	A	A	H	T	L	E	D	C	A	S	R	N	R
Template Known Secondary structure			T	T															T
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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