Job Description A0AVF1 Confidence 84.08% Date Sat Jun 16 10:27:57 BST 2012 Rank 140 Aligned Residues 133 % Identity 12% Template c2wpvG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:upf0363 protein yor164c; PDBTitle: crystal structure of s. cerevisiae get4-get5 complex Resolution 1.99 Å

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		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	K	I	A	Q	Q	F	F	Q	L	V	G	G	S	A	S	E	C	D	T	I	P	G	R	Q	C	M	A	S	C	F	F	L	L	K	Q	F	D	D	V	L	I	Y	L	N	S	F	K	S	Y	F	Y	N	D	D	I	F	N	F	N	Y	A	Q	A	K	A	A	T	G	N	T	S	E	G	E	E	A	F	L
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	A	K	T	L	Q	R	F	E	N	K	I	K	A	G	D	Y	Y	E	A	H	Q	T	L	R	T	I	A	N	R	Y	V	R	S	K	S	Y	E	H	A	I	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	Q	G	A	L	S	F	L	K	A	K	Q	G	G	S	G	T	D	L	I	F
Template Known Secondary structure																T	T																			T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		418	.	420	.	.					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.										.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure							.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query Sequence		L	I	Q	S	E	.	.	.	.	K	M	K	N	D	Y	I	Y	L	S	W	L	A	R	C	Y	I	M	N	K	K	P	R	L	A	W	E	L	Y	L	K	M	E	T	.	.	.	.	.	.	.	.	.	S	G	E	S	F	S	L	L	Q	L	I	A	N	D	C	Y	K	M	G	Q	F	Y	Y	S	A	K	A	F
Query Conservation							.	.	.	.																																			.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	L	E	V	Y	D	L	A	E	V	K	V	D	D	I	S	V	A	R	L	V	R	L	I	A	E	L	D	P	S	E	P	N	L	K	D	V	I	T	G	M	N	N	W	S	I	K	F	S	E	Y	K	F	G	D	P	Y	L	H	N	T	I	G	S	K	L	L	E	G	D	F	V	Y	E	A	E	R	Y	F
Template Known Secondary structure										T	T				S														S		T	T		T	T															T	S	S		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions