Job Description A0AVF1 Confidence 99.73% Date Sat Jun 16 10:27:57 BST 2012 Rank 53 Aligned Residues 135 % Identity 16% Template c2hyzA_ PDB info PDB header:de novo protein Chain: A: PDB Molecule:synthetic consensus tpr protein; PDBTitle: crystal structure of an 8 repeat consensus tpr superhelix2 (orthorombic crystal form) Resolution 2.30 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	R	Q	C	M	A	S	C	F	F	L	L	K	Q	F	D	D	V	L	I	Y	L	N	S	F	K	S	Y	F	Y	N	D	D	I	F	N	F	N	Y	A	Q	A	K	A	A	T	G	N	T	S	E	G	E	E	A	F	L	L	I	Q	S	E	K	M	K	N	D	Y	I	Y	L	S	W	L	A	R	C	Y
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		A	E	A	W	Y	N	L	G	N	A	Y	Y	K	Q	G	D	Y	D	E	A	I	E	Y	Y	Q	K	A	L	E	L	D	P	R	S	A	E	A	W	Y	N	L	G	N	A	Y	Y	K	Q	G	D	Y	D	E	A	I	E	Y	Y	Q	K	A	L	E	L	D	P	R	S	.	A	E	A	W	Y	N	L	G	N	A	Y
Template Known Secondary structure																T																	T	T															T	T																	T	T		.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		I	M	N	K	K	P	R	L	A	W	E	L	Y	L	K	M	.	E	T	S	G	E	S	F	S	L	L	Q	L	I	A	N	D	C	Y	K	M	G	Q	F	Y	Y	S	A	K	A	F	D	V	L	E	R	L	D	P	N	P
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		Y	K	Q	G	D	Y	D	E	A	I	E	Y	Y	Q	K	A	L	E	L	D	P	R	S	A	E	A	W	Y	N	L	G	N	A	Y	Y	K	Q	G	D	Y	D	E	A	I	E	Y	Y	Q	K	A	L	E	L	D	P	R	S
Template Known Secondary structure				T	T																	T	T														T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions