Job Description A0AVF1 Confidence 99.56% Date Sat Jun 16 10:27:57 BST 2012 Rank 80 Aligned Residues 118 % Identity 17% Template c1ihgA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:cyclophilin 40; PDBTitle: bovine cyclophilin 40, monoclinic form Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	E	E	L	L	S	K	R	D	F	T	G	A	I	T	L	L	E	F	K	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	E	E	E	E	D	T	N	L	W	I	G	Y	C	A	F	H	L	G	D	Y	K	R	A	L	E	E	Y	E	N	A	T	K	E	E	N	C	N	S	E
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	N	T	F	F	K	S	Q	N	W	E	M	A	I	K	K	Y	T	K	V	L	R	Y	V	E	G	S	R	A	A	A	E	D	A	D	G	A	K	L	Q	P	V	A	L	S	C	V	L	N	I	G	A	C	K	L	K	M	S	D	W	Q	G	A	V	D	S	C	L	E	A	L	E	I	D	P	S	N	T	K
Template Known Secondary structure									T	T																							S						G	G	G																		T	T														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	V	N	L	A	C	T	Y	F	F	L	G	M	Y	K	Q	A	E	A	A	G	F	K	A	S	K	S	R	L	Q	N	R	L	L	F	H	L	A	H	K	F	N	D	E	K	K	L	M	S	F	H	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	Y	R	R	A	Q	G	W	Q	G	L	K	E	Y	D	Q	A	L	A	D	L	K	K	A	Q	E	I	A	P	E	D	K	A	I	Q	A	E	L	L	K	V	K	Q	K	I	K	A	Q	K	D	K	E	K
Template Known Secondary structure													T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions