Job Description O43639 Confidence 97.79% Date Sat Jun 16 10:26:44 BST 2012 Rank 305 Aligned Residues 189 % Identity 14% Template c3npfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution Resolution 1.72 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	V	K	G	S	R	V	T	V	M	E	K	C	S	D	G	W	W	R	G	S	Y	.	N	G	Q	I	G	W	F	P	S	N	Y	V	L	E	E	V	D	E	A	A	A	E	S	P	S	F	L	S	L	R	K	G	A	S	L	S	N	G	Q	G	S	R	V	L	H	V	V	Q	T	L	Y	P	F	S	S	V	T
Query Conservation																								.
Alig confidence														.	.									.																																																			.	.	.	.	.	.	.
Template Conservation														.	.																																																												.	.	.	.	.	.	.
Template Sequence		A	L	L	G	X	P	V	K	V	L	Q	Y	.	.	N	G	W	Y	E	I	Q	T	P	D	D	Y	T	G	W	V	H	R	X	V	I	T	P	X	S	K	E	R	Y	D	E	W	N	R	A	E	K	I	V	V	T	S	H	Y	G	F	A	Y	E	K	P	D	E	S	S	Q	P	V	S	.	.	.	.	.	.	.
Template Known Secondary structure				T	T									.	.	S	S							T	T	S							G	G	G															S							S	S						S	S	S	S	T	T	S					.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																																												.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	E	E	L	N	F	E	K	G	E	T	M	E	V	I	E	K	P	E	N	D	P	E	W	W	K	C	K	N	A	R	G	Q	V	G	L	V	P	K	N	Y	V	V	V	L	S	D	G	P	A	L	H	P	A	H	A	P	Q	I	S	Y	T	G	P	S	S	S	G	R	F	A	G	R	E	W	Y	Y	G	N	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.														.	.	.																																													.	.	.	.												.
Template Conservation		.	.	.	.														.	.	.																																													.	.	.	.
Template Sequence		.	.	.	.	D	V	V	A	G	N	R	L	K	W	E	G	S	.	.	.	K	G	H	F	Y	Q	V	S	Y	P	D	G	R	K	A	Y	L	S	K	S	I	S	Q	P	E	A	G	W	R	A	S	L	K	Q	D	V	E	S	I	I	E	T	A	Y	.	.	.	.	S	X	X	G	I	P	Y	L	W	A	G	T
Template Known Secondary structure		.	.	.	.				T	T									.	.	.		T	T							T	T	S							T	T	S										T				S										.	.	.	.	T	T	T	T		B	B		T	T
Template Predicted Secondary structure		.	.	.	.														.	.	.																																													.	.	.	.
Template SS confidence
						128	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.
																						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	R	H	Q	A	E	C	A	L	N	E	R	G	V	E	G	D	F	L	I	R	D	S	E	S	S	P	S	D	F	S	V	S	L	K	.	.	.	.	.	A	S	G	K	N	K	H	F	K	V	Q	L	V	D	N	V	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																								.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		S	S	K	G	V	D	S	G	L	V	R	T	V	L	F	X	H	D	I	I	I	P	R	D	A	S	Q	Q	A	Y	V	.	.	G	E	H	I	D	I	A	P	D	F	S	N	V	K	R	G	D	L	V	F	F	G	R	K	A	T	A	E	R	K	E	G	I	S	H	V	G	I	Y	L	G	N	K	Q	F
Template Known Secondary structure			T	T													T	T	T					S	S					T	T	S	.	.	S							T	T		T	T			T	T											S	S	S													T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions