Job Description O43639 Confidence 32.34% Date Sat Jun 16 10:26:44 BST 2012 Rank 350 Aligned Residues 117 % Identity 16% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		A	Y	V	A	E	R	E	D	E	L	S	L	V	K	G	S	R	V	T	V	M	E	K	C	S	D	G	.	W	W	R	G	S	Y	N	G	Q	I	G	W	F	P	S	N	Y	V	L	E	E	V	D	E	A	A	A	E	S	P	S	F	L	S	L	R	K	G	A	S	L	S	N	G	Q	G	S	R	V	L	H	V
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		G	Y	P	F	D	X	F	Q	R	T	A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	E	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	Y	E	S	G	S	L	A	A	I	L	R	D	D	T	S	L	N	G	A	D	G	T	H	L
Template Known Secondary structure		S	T	T			T	T							T	T										T	T	S	S							S	S							G	G	G														S	S							S	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		V	Q	T	L	Y	P	F	S	S	V	T	E	E	E	L	N	F	E	K	G	E	T	M	E	V	I	E	K	P	E	N	D	P	E	.	W	W	K	C	K	N	A	R	G	Q	V	G	L	V	P	K	N	Y
Query Conservation																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	A	H	I	G	T	V	L	P	L	S	G	A	S	Q	V	G	R	T	V	L	V	P	V	R	A	P	E	G	H	A	V	V	V	P	V	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										S	S											T	T	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions