Job Description O43639 Confidence 99.93% Date Sat Jun 16 10:26:44 BST 2012 Rank 39 Aligned Residues 112 % Identity 25% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	K	N	Y	V	V	V	L	S	D	G	P	A	L	H	P	A	H	A	P	Q	I	S	Y	T	G	P	S	S	S	G	R	F	A	G	R	E	W	Y	Y	G	N	V	T	R	H	Q	A	E	C	A	L	N	E	R	G	V	E	G	D	F	L	I	R	D	S	E	S	S	P	S	D	F	S	V	S	L	K
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		M	V	Q	S	S	L	T	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	.	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T		B			S										T	T	T	S	.		T	T								S	S	T	T		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.																							10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.											.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	G	K	N	K	H	F	K	V	Q	L	V	D	N	V	Y	C	I	G	.	.	.	.	Q	R	R	F	H	T	M	D	E	L	V	E	H	Y	K	K	A	.	.	.	.	.	.	.	.	.	.	P	I	F	T	S	E	H	G	E	K	L	Y	L	V	R	A	L	Q
Query Conservation																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	G	K	T	L	H	T	R	I	E	H	S	N	G	R	F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V	R	L	T	N	P	V	S
Template Known Secondary structure			T	T											T	T					T	T			S				B	S	S															T						S			S	T	T											B
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions