Return to main results Retrieve Phyre Job Id

Job DescriptionO43639
Confidence99.93%DateSat Jun 16 10:26:44 BST 2012
Rank41Aligned Residues98
% Identity27%Templatec2oq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase zap-70; PDBTitle: tandem sh2 domains of zap-70 with 19-mer zeta1 peptide
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300... ......310.........320.........330........ .340....... ..350....
Predicted Secondary structure 












.














.



.


Query SS confidence 

























.


































.








.






Query Sequence  GRFAGREWYYGNVTRHQAECALNERG. VEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLV. DNVYCIGQR. RFHTMDE
Query Conservation         
  
   
  
   
    .  
 



 
        

        
  
   .         . 
 
   
Alig confidence 

























.


































.








.






Template Conservation         

 
 
 
  

  
       
 



 
    
   


     
 
  
               
 

  
Template Sequence  DPAAHLPFFYGSISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAE
Template Known Secondary structure 
TTTT
TTB
BS

TT

TT

SSSTT
TT
TTS
TTS

BSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   355....360.........370.........380
Predicted Secondary structure 












Query SS confidence 

























Query Sequence  LVEHYKKAPIFTSEHGEKLYLVRALQ
Query Conservation 

  
   

          
  
  
Alig confidence 









.....










Template Conservation 

  
     ..... 
   
  
  
Template Sequence  LCEFYSRDPD. . . . . GLPCNLRKPCN
Template Known Secondary structure 

T.....TSSS


SB

Template Predicted Secondary structure 


.....







Template SS confidence 

























   85....90.... .....100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions