Job Description O43639 Confidence 99.56% Date Sat Jun 16 10:26:44 BST 2012 Rank 266 Aligned Residues 71 % Identity 25% Template c2jmcA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:spectrin alpha chain, brain and p41 peptide PDBTitle: chimer between spc-sh3 and p41 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	E	D	E	L	S	L	V	K	G	S	R	V	T	V	M	E	K	C	S	D	G	W	W	R	G	S	Y	N	G	Q	I	G	W	F	P	S	N	Y	V	L	E	E	V	D	E	A	A	A	E	S	P	S	F	L	S	L	R	K	G	A	S	L	S	N	G	Q	G	S	R	V	L	H	V	V	Q	T	L
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	G	P	R	E	V	T	M	K	K	G	D	I	L	T	L	L	N	S	T	N	K	D	W	W	K	V	E	V	N	D	R	Q	G	F	V	P	A	A	Y	V	K	K	L	D	S	G	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	V	L	A	L
Template Known Secondary structure			S	S	S							T	T											S	S							T	T							G	G	G							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																								.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	F	S	S	V	T	E	E	E	L	N	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	Y	Q	E	S	G	D	N	A	P	S	Y	S
Template Known Secondary structure		S					S	S						S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions