Job Description O43639 Confidence 99.75% Date Sat Jun 16 10:26:44 BST 2012 Rank 107 Aligned Residues 142 % Identity 15% Template c2dybA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox) Resolution 3.15 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	K	W	D	Y	T	A	Q	Q	D	Q	E	L	D	I	K	K	N	E	R	L	W	L	L	D	D	S	K	T	W	W	R	V	R	N	A	A	N	R	T	G	Y	V	P	S	N	Y	V	E	R	K	N	S	L	K	K	G	S	L	V	K	N	L	K	D	T	L	G	L	G	K	T	R	R	K	T	S	A
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	A	L	F	D	F	T	G	N	S	K	L	E	L	N	F	K	A	G	D	V	I	F	L	L	S	R	I	N	K	D	W	L	E	G	T	V	R	G	A	T	G	I	F	P	L	S	F	V	K	I	L	K	D	F	P	E	E	D	D	P	T	N	W	L	R	C	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S		B			S	S	S	S	B			B		T	T										S	S	S							T	T							G	G	G										T	T										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																	.	.																				.	.	.
Query SS confidence																																																	.	.																				.	.	.
Query Sequence		R	D	A	S	P	T	P	S	T	D	A	E	Y	P	A	N	G	S	G	A	D	R	I	Y	D	L	N	I	P	A	F	V	K	F	A	Y	V	A	E	R	E	D	E	L	S	L	V	.	.	K	G	S	R	V	T	V	M	E	K	C	S	D	G	W	W	R	G	S	.	.	.	Y	N	G	Q	I	G	W	F	P
Query Conservation																																																	.	.																				.	.	.
Alig confidence		.	.																																														.	.																				.	.	.
Template Conservation		.	.
Template Sequence		.	.	Y	Y	E	D	T	I	S	T	I	K	D	I	A	V	E	E	D	L	S	S	T	P	L	L	K	D	L	L	E	L	T	R	R	E	F	Q	R	E	D	I	A	L	N	Y	R	D	A	E	G	D	L	V	R	L	L	S	D	E	D	V	A	L	M	V	R	Q	A	R	G	L	P	S	Q	K	R	L	F	P
Template Known Secondary structure		.	.				S	S											S		T	T																	T		S									S	S	S							S												T	T	S			B	T	T	B		S
Template Predicted Secondary structure		.	.
Template SS confidence
				244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions