Return to main results Retrieve Phyre Job Id

Job DescriptionO43639
Confidence99.66%DateSat Jun 16 10:26:44 BST 2012
Rank159Aligned Residues54
% Identity28%Templatec2df6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........
Predicted Secondary structure 



























Query SS confidence 





















































Query Sequence  IVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERK
Query Conservation   






 
   




 


 
 

   
 

      
  
 

 



  
Alig confidence 





















































Template Conservation   
 

 

      


   

 
 

      
      
  
 

  


 
Template Sequence  VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI
Template Known Secondary structure  SS
B

SSTTB

B
TT

SSSTTGGG
Template Predicted Secondary structure 




















Template SS confidence 





















































   10.........20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions