Return to main results Retrieve Phyre Job Id

Job DescriptionO43639
Confidence35.93%DateSat Jun 16 10:26:44 BST 2012
Rank346Aligned Residues33
% Identity21%Templatec2brqA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:filamin a; PDBTitle: crystal structure of the filamin a repeat 21 complexed with2 the integrin beta7 cytoplasmic tail peptide
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320......... 330......
Predicted Secondary structure 













.....
Query SS confidence 

























. . . . .






Query Sequence  VEGDFLIRDSESSPSDFSVSLKASGK. . . . . NKHFKVQ
Query Conservation    
 



 
        

      .....  
  
 
Alig confidence 

























.....






Template Conservation    
 
 
 
 
   
   
 
   
  
 



   
 
Template Sequence  KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVA
Template Known Secondary structure  TTSSSS
TT
TT
S
Template Predicted Secondary structure 















Template SS confidence 





































   22892290.........2300.........2310.........2320......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions