Job Description Q01804 Confidence 99.31% Date Wed Jun 6 09:57:10 BST 2012 Rank 7 Aligned Residues 126 % Identity 21% Template d1tffa_ SCOP info Cysteine proteinases Cysteine proteinases Ubiquitin thiolesterase protein OTUB2 (Otubain-2) Resolution 2.10

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																							.	.																																										.	.								.
Query SS confidence																							.	.																																										.	.								.
Query Sequence		M	D	A	Y	L	R	K	L	G	L	Y	R	K	L	V	A	K	D	G	S	C	.	.	L	F	R	A	V	A	E	Q	V	L	H	S	Q	S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	S	.	.	F	E	E	Y	L	K	R	.	L	E	N	P	Q	E
Query Conservation																							.	.																																										.	.								.
Alig confidence																							.	.									.																																	.	.								.
Template Conservation																																	.
Template Sequence		F	R	N	F	F	N	A	F	Y	S	V	V	E	L	V	E	K	D	G	S	V	S	S	L	L	K	V	F	N	D	Q	.	S	A	S	D	H	I	V	Q	F	L	R	L	L	T	S	A	F	I	R	N	R	A	D	F	F	R	H	F	I	D	E	E	X	D	I	K	D	F	C	T	H	E	V	E	P	X	A	T
Template Known Secondary structure																			T											T	S		.																					T					G	G	G	S		T	T	S										T	S	S	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	G	Q	V	E	I	S	A	L	S	L	M	Y	R	K	D	F	I	I	Y	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K
Query Conservation
Alig confidence																							.					.	.	.																			.
Template Conservation																							.					.	.	.																			.
Template Sequence		E	C	D	H	I	Q	I	T	A	L	S	Q	A	L	S	I	A	L	Q	V	E	.	Y	V	D	H	.	.	.	H	V	F	P	E	A	A	T	P	S	V	Y	L	L	Y	K	T	S	.	H	Y	N	I	L	Y	A	A	D
Template Known Secondary structure																T							.					.	.	.							S	S		S							T	T	.
Template Predicted Secondary structure																							.					.	.	.																			.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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