Job Description Q01804 Confidence 17.58% Date Wed Jun 6 09:57:10 BST 2012 Rank 99 Aligned Residues 67 % Identity 24% Template d1cdwa2 SCOP info TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain Resolution 1.90

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	I	S	A	L	S	L	M	Y	R	K	D	F	I	I	Y	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K	Y	K	E	S	S	A	M	C	Q	S	L	L	Y	E	L	L	Y	E
Query Conservation
Alig confidence															.				.																											.																				.
Template Conservation															.				.																											.																				.
Template Sequence		I	R	L	E	G	L	V	L	T	H	Q	Q	F	.	S	S	Y	.	E	P	E	L	F	P	G	L	I	Y	R	M	I	K	P	R	I	V	L	L	I	F	V	S	G	K	.	V	V	L	T	G	A	K	V	R	A	E	I	Y	E	A	F	E	N	I	.	Y	P	I	L	K	G
Template Known Secondary structure		B									T	T	T	T	.				.		T	T	T		S	S						T	T	T	T							T	T	S		.							S	S												.						T
Template Predicted Secondary structure															.				.																											.																				.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions