Job Description Q01804 Confidence 99.37% Date Wed Jun 6 09:57:10 BST 2012 Rank 6 Aligned Residues 117 % Identity 24% Template c4dhjL_ PDB info PDB header:hydrolase/signaling protein/ligase Chain: L: PDB Molecule:ubiquitin thioesterase otubain-like; PDBTitle: the structure of a ceotub1 ubiquitin aldehyde ubc13~ub complex Resolution 2.35 Å

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		39	40	.	.	.	.	.	.	.	.	.																																							50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	K	D	G	S	C	L	F	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	Q	V	L	H	S	Q	S	R	H	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	G	D	G	N	C	F	Y	R	A	I	L	V	G	L	I	E	I	M	L	K	D	R	A	R	L	E	K	F	I	A	S	S	R	D	W	T	R	T	L	V	E	L	G	F	P	D	W	T	C	T	D	F	C	D	F	F	I	E	F	L	E	K	I	H	S	G	V	H	T	E	E	A	V	Y	T	I	L	N
Template Known Secondary structure		B			S	T	T																																						T	T																							T	S	S										T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
													64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.	.										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	.	.	S	F	E	E	Y	L	K	R	L	.	E	N	P	Q	E	W	V	G	Q	V	E	I	S	A	L	S	L	M	Y	R	K	D	F	I	I	Y	R	E	P	N	V	S	P	S	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																							.	.										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.										.
Template Conservation
Template Sequence		D	D	G	S	A	N	Y	I	L	M	F	F	R	L	I	T	S	A	F	L	K	Q	N	S	E	E	Y	A	P	F	I	D	E	G	M	T	V	A	Q	Y	C	E	Q	E	I	E	P	M	W	K	D	A	D	H	L	A	I	N	S	L	I	K	A	A	G	T	R	V	R	I	E	Y	M	D	R	T	A	A	P	N
Template Known Secondary structure																								T					G	G	G			T	T											T	S	S	T	T															T	T										S	S			S	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		V	T	E	.	.	.	.	.	.	.	.	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.															.
Template Conservation																											.
Template Sequence		G	G	W	H	Y	D	I	P	S	D	D	Q	Q	I	A	P	E	I	T	L	L	Y	R	P	G	.	H	Y	D	V	I	Y	K	K	D
Template Known Secondary structure		T							S			S	T	T				S							T	T	.
Template Predicted Secondary structure																											.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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