Job Description Q01804 Confidence 85.46% Date Wed Jun 6 09:57:10 BST 2012 Rank 25 Aligned Residues 122 % Identity 21% Template c3zrhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin thioesterase zranb1; PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd) Resolution 2.23 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																							80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	R	K	L	V	A	K	D	G	S	C	L	F	R	A	V	A	E	Q	V	L	H	S	Q	S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	F	I	E	G	S	F	E	E	Y	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	A	L	W	N	R	T	A	G	D	C	L	L	D	S	V	L	Q	A	T	W	G	I	Y	D	K	D	S	V	L	R	K	A	L	H	D	S	L	H	D	C	S	H	W	F	Y	T	R	W	K	D	W	E	S	W	Y	S	Q	S	F	G	L	H	F	S	L	R	E	E	Q	W	Q	E	D	W	A	F	I	L
Template Known Secondary structure					B					S	S										T	T	T	S	S			G	G	G													T																			T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120														.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	L	E	N	P	Q	E	W	V	G	Q	V	E	I	S	A	L	S	L	M	Y	R	K	D	F	I	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																																				.
Template Sequence		S	L	A	S	Q	P	G	A	S	L	E	Q	T	H	I	F	V	L	A	H	I	L	R	R	P	I	I	V	Y	G	V	K	Y	Y	K	T	L	G	Y	T	R	F	Q	G	V	Y	L	P	L	L	W	E	Q	S	F	C	W	K	S	P	I	A	L	G	Y	T	.	R	G	H	F	S	A	L	V	A	M	E
Template Known Secondary structure				T	T	S	T	T															T	T	S								S	S																T	T	S		G	G	G	S		S									.	T	T								B
Template Predicted Secondary structure																																																																				.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.		.	.	580	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions