Job Description Q01804 Confidence 34.84% Date Wed Jun 6 09:57:10 BST 2012 Rank 54 Aligned Residues 197 % Identity 12% Template c3nafA_ PDB info PDB header:ion transport Chain: A: PDB Molecule:calcium-activated potassium channel subunit alpha-1; PDBTitle: structure of the intracellular gating ring from the human high-2 conductance ca2+ gated k+ channel (bk channel) Resolution 3.10 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	E	N	P	Q	E	W	V	G	Q	V	E	I	S	A	L	S	L	M	Y	R	K	D	F	I	I	Y	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K	Y	K	E	S	S	A	M	C	Q	S	L	L	Y	E	L
Query Conservation
Alig confidence																															.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		T	S	L	Q	D	K	E	C	I	L	A	S	L	N	I	K	S	M	Q	F	D	T	G	V	N	I	P	I	I	.	.	.	.	.	.	.	T	E	L	V	N	D	T	N	V	Q	F	L	D	Q	D	D	D	D	D	P	D	T	E	L	Y	L	T	Q	P	F	A	C	G	T	A	F	A	V	S	V	L	D	S	L
Template Known Secondary structure		S	S	S	T	T																		T	T						.	.	.	.	.	.	.				S	S	T	T	G	G	G	G	G	S			T	T			T	T			G	G	G	S						T	S				T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.								.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		L	Y	E	K	V	F	K	T	D	V	S	K	I	V	M	E	L	D	T	L	E	V	A	D	.	.	E	D	N	S	E	I	S	D	S	E	D	D	S	C	K	S	K	T	A	A	A	A	A	D	V	N	G	F	K	P	L	S	G	N	E	L	K	N	N	G	N	S	T	S	L	P	L	S	R	K	V	L	K	S
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		M	S	A	T	Y	F	N	D	N	I	L	T	L	I	R	T	L	V	T	G	G	A	T	P	E	L	E	A	L	I	A	E	E	N	A	L	R	G	G	Y	S	T	P	Q	T	L	A	N	R	D	R	C	R	V	A	Q	L	A	L	L	D	G	P	F	A	D	L	G	D	G	G	C	Y	G	D	L	F	C	K	A
Template Known Secondary structure									T											S		S									T	T	T	S	S	S								T	T	G	G	G	T	T										S	T	T	S	S	T	T	T	T	T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.
		250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																												.	.	.
Query SS confidence						.	.	.	.	.	.																												.	.	.
Query Sequence		L	N	P	A	.	.	.	.	.	.	V	Y	R	N	V	E	Y	E	I	W	L	K	S	K	Q	A	Q	Q	K	R	D	Y	S	I	A	A	G	.	.	.	L	Q	Y	E	V	G	D	K	C	Q	V	R	L	D	H	N	G	K
Query Conservation						.	.	.	.	.	.																												.	.	.
Alig confidence						.	.	.	.	.	.															.	.	.											.	.	.
Template Conservation																										.	.	.
Template Sequence		L	K	T	Y	N	M	L	C	F	G	I	Y	R	L	R	D	A	H	L	S	T	P	S	Q	.	.	.	C	T	K	R	Y	V	I	T	N	P	P	Y	E	F	E	L	V	P	T	D	L	I	F	C	L	M	Q	F	D	H	N
Template Known Secondary structure				T	T											S	T	T	S	S	S					.	.	.									S			T	T					S	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.				.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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