Job Description Q01804 Confidence 96.37% Date Wed Jun 6 09:57:10 BST 2012 Rank 13 Aligned Residues 126 % Identity 16% Template c3dkbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 3; PDBTitle: crystal structure of a20, 2.5 angstrom Resolution 2.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		Y	L	R	K	L	G	L	Y	R	K	L	V	A	K	D	G	S	C	L	F	R	A	V	A	.	.	.	.	.	.	.	.	E	Q	V	L	H	S	Q	S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	S	F	E	E	Y	L	K	R	L	E	N	P	Q	E
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																																					.			.
Template Conservation																																																																						.			.
Template Sequence		C	R	E	V	R	K	L	V	A	L	K	T	N	G	D	G	N	C	L	M	H	A	T	S	Q	Y	M	W	G	V	Q	D	T	D	L	V	L	R	K	A	L	F	S	T	L	K	E	T	D	T	R	N	F	K	F	R	W	Q	L	E	S	L	K	S	Q	E	F	V	.	E	Y	.	D	T	R	N	W	N	D	E
Template Known Secondary structure			S	S	B						B					S	S													S	S		S	T	T														S																		S	S		.			.		S	S		S	S
Template Predicted Secondary structure																																																																						.			.
Template SS confidence
		6086	.	.	.	6090	.	.	.	.	.	.	.	.	.	6100	.	.	.	.	.	.	.	.	.	6110	.	.	.	.	.	.	.	.	.	6120	.	.	.	.	.	.	.	.	.	6130	.	.	.	.	.	.	.	.	.	6140	.	.	.	.	.	.	.	.	.	6150	.	.	.		.	.		.	.	.	.	6160	.	.	.
		100	.	.	.	.	.	.	.																							.	.	110	.	.	.	.	.	.	.	.	.																120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	G	Q	V	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	L	M	Y	R	K	D	F	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	D	N	L	I	K	M	A	S	T	D	T	P	M	A	R	S	G	L	Q	Y	N	S	L	E	E	I	H	I	F	V	L	C	N	I	L	R	R	P	I	I	V	I	S	D	K	M	L	R	S	L	E	S	G	P	L	K	V	G	G	I	Y	L	P	L	H	W	P	A	Q	E	C	Y	R	Y	P	I	V	L	G
Template Known Secondary structure									T	S	S				S	S	S	S	S		S	S															T	T	S											T	T															T	T	S		T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		6168	.	6170	.	.	.	.	.	.	.	.	.	6180	.	.	.	.	.	.	.	.	.	6190	.	.	.	.	.	.	.	.	.	6200	.	.	.	.	.	.	.	.	.	6210	.	.	.	.	.	.	.	.	.	6220	.	.	.	.	.	.	.	.	.	6230	.	.	.	.	.	.	.	.	.	6240	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	N	G	N	H	Y	D	I	V	Y	P	I	K
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		Y	D	.	S	H	H	F	V	P	L	V	T	L	K
Template Known Secondary structure				.	S	S								B
Template Predicted Secondary structure				.
Template SS confidence
		6252	.		.	.	.	.	.	.	6260	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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