Job Description Q01804 Confidence 99.96% Date Wed Jun 6 09:57:10 BST 2012 Rank 1 Aligned Residues 141 % Identity 24% Template c3c0rC_ PDB info PDB header:cell cycle, hydrolase Chain: C: PDB Molecule:ubiquitin thioesterase otu1; PDBTitle: structure of ovarian tumor (otu) domain in complex with ubiquitin Resolution 2.31 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	Y	R	K	L	V	A	K	D	G	S	C	L	F	R	A	V	A	E	Q	V	L	H	S	Q	S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	.	S	F	E	E	Y	L	K	R	L	E	N	P	Q	E	W	V	G	Q	V	E	I	S	A	L	S	L	M
Query Conservation																																																						.
Alig confidence																									.																													.
Template Conservation																									.
Template Sequence		L	S	V	H	P	V	L	D	D	N	S	C	L	F	H	A	I	A	Y	G	I	F	K	.	Q	D	S	V	R	D	L	R	E	X	V	S	K	E	V	L	N	N	P	V	K	F	N	D	A	I	L	D	K	P	N	K	D	Y	A	Q	W	I	L	K	X	E	S	W	G	G	A	I	E	I	G	I	I	S	D	A
Template Known Secondary structure										S	T	T												S	.	S			S															T	T	T	T						T	S									T	T	S	T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	K	D	F	I	I	Y	R	E	P	N	V	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K	Y	K	E	S	S	A	M	C	Q	S	L	L	Y	E	L	L	Y	E	K	V
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		L	A	V	A	I	Y	V	V	D	I	D	A	V	K	I	E	K	F	N	E	D	K	F	D	N	Y	I	L	I	L	F	.	N	G	I	H	Y	D	S	L	T	X	N	E	F	K	T	V	F	N	K	N	Q	P	E	S	D	D	V	L	T	A	A	L
Template Known Secondary structure			T								T	T	T	T						S	T	T	T		S								.		S	S								T	T	T	B					T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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