Job Description Q01804 Confidence 95.43% Date Wed Jun 6 09:57:10 BST 2012 Rank 15 Aligned Residues 121 % Identity 13% Template c2vfjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor; PDBTitle: structure of the a20 ovarian tumour (otu) domain Resolution 3.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		Y	L	R	K	L	G	L	Y	R	K	L	V	A	K	D	G	S	C	L	F	R	A	V	A	E	Q	V	L	H	.	.	.	.	.	.	.	.	S	Q	S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	S	F	E	E	Y	L	K	R	L	E	N	P	Q	E
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		C	R	E	V	R	K	L	V	A	L	K	T	N	G	D	G	N	C	L	M	H	A	T	S	Q	Y	M	W	G	V	Q	D	T	D	L	V	L	R	K	A	L	F	S	T	L	K	E	T	D	T	R	N	F	K	F	R	W	Q	L	E	S	L	K	S	Q	.	.	.	.	.	.	.	.	E	R	N	W	N	D	E
Template Known Secondary structure			T	T	B						B					S	S													S	S			T	T													S	S																T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		W	V	G	Q	V	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	L	M	Y	R	K	D	F	I	I	Y	R	E	P	N	V	.	.	.	S	P	S	Q	V	T	E	N	N	F	P	E	K	V	L	L	C	F	S	N	G	N	H	Y	D	I	V	Y	P	I	K
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		W	D	N	L	I	K	M	A	S	T	D	T	P	M	A	G	L	Q	Y	N	S	L	E	E	I	H	I	F	V	L	C	N	I	L	R	R	P	I	I	V	I	S	D	K	V	G	G	I	Y	L	P	L	H	W	P	A	Q	E	C	Y	R	Y	P	I	V	L	G	Y	D	S	H	H	F	V	P	L	V	T	L	K
Template Known Secondary structure									T	S	S	S							S	S																T	S																T	T	S		G	G	G	S			S								T	T								B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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