Job Description Q01804 Confidence 25.04% Date Wed Jun 6 09:57:10 BST 2012 Rank 74 Aligned Residues 41 % Identity 20% Template c1w7pD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:vps36p, ylr417w; PDBTitle: the crystal structure of endosomal complex escrt-ii2 (vps22/vps25/vps36) Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	H	V	E	V	R	M	A	C	I	H	Y	L	R	E	N	R	E	K	F	E	A	F	I	E	G	S	F	E	E	Y	L	K	R	L	E	N	P	Q	E	W	V	G	Q	V	E	I	S	A	L	S	L	M	Y	R	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	L	D	E	I	A	R	E	I	Y	E	F	T	L	S	E	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	S	D	T	N	Y	M	I	I	T	L	V	D	L	Y	A	M	Y	N	K
Template Known Secondary structure																		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.																	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions