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Job DescriptionQ12888
Confidence85.25%DateTue Apr 3 15:01:59 BST 2012
Rank86Aligned Residues160
% Identity18%Templatec3pdiB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1784.....1790.........1800.........1810.........1820....... ..1830........ .1840.......
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Query Sequence  AGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVS. . . . . . . . . . HVWVHDSCHAN. . . . . . QLQNYRNYL
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Template Sequence  GGLSVAELATAG. . QSVATLVVGQSLAGAADALAER. TGVPDRRFGMLYGLDAVDAWLMALAEISGNPVPDRYKRQRAQL
Template Known Secondary structure 
SB
GGGS..S
S
SGGG.S




S
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   224.....230..... ....240.........250....... ..260.........270.........280.........290.........300
 
   1848.1850.........1860.........1870.........1880.........1890.........1900.........1910.........1920.......
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Query Sequence  LPAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCP
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Template Sequence  QDA. . . . . . . . MLDTHFM. . . LSSARTAIAADP. . DLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVRVGDLEDL
Template Known Secondary structure  ...........TT


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   301.. ......310 .........320.. .......330.........340.........350.........360.......
 
   1928.1930... ......1940.........1950.........1960.........1970..
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Query Sequence  ASVLKC. . . . . . . . . . . . . . . AEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
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Template Sequence  EHAARAGQAQLVIGNSHALASARRLGVPL. . . . . . . . . . . . . LRAGFPQYDLLGGFQRCW
Template Known Secondary structure  T
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TTTT

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TT
TTGGG


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   368.370.........380.........390...... ...400.........410....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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