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Job DescriptionQ12888
Confidence100.00%DateTue Apr 3 15:01:59 BST 2012
Rank1Aligned Residues231
% Identity100%Templatec1kzyD_
PDB info PDB header:dna binding protein, protein bindingChain: D: PDB Molecule:tumor suppressor p53-binding protein 1; PDBTitle: crystal structure of the 53bp1 brct region complexed to2 tumor suppressor p53
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1715....1720.........1730.........1740.........1750.........1760.........1770.........1780.........1790....
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Query Sequence  LEEQRGPLPLNKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEA
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Template Sequence  LEEQRGPLPLNKTLFLGYAFLLTMA. . . . . . . . . . . . . . . . . . . . . . . . . . . TIPPFNKQYTESQLRAGAGYILEDFNEA
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SSTTTTTT


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TT

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   1715....1720.........1730......... 1740.........1750.........1760.......
 
   1795....1800.........1810.........1820.........1830.........1840.........1850.........1860.........1870....
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Query Sequence  QCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKV
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Template Sequence  QCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKV
Template Known Secondary structure  T
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ST

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GGGSB


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TTTT
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   1795....1800.........1810.........1820.........1830.........1840.........1850.........1860.........1870....
 
   1875....1880.........1890.........1900.........1910.........1920.........1930.........1940.........1950....
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Query Sequence  LLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVG
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Template Sequence  LLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVG
Template Known Secondary structure  S
TTTTTT
SSSSS


S
TTS
S
TT

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T
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   1875....1880.........1890.........1900.........1910.........1920.........1930.........1940.........1950....
 
   1955....1960.........1970..
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Query Sequence  ERIGFKQHPKYKHDYVSH
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Template Sequence  ERIGFKQHPKYKHDYVSH
Template Known Secondary structure  S


TTSSGGGSTT



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   1955....1960.........1970..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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