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Job DescriptionQ12888
Confidence99.56%DateTue Apr 3 15:01:59 BST 2012
Rank18Aligned Residues183
% Identity13%Templatec3t7kB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:regulator of ty1 transposition protein 107; PDBTitle: complex structure of rtt107p and phosphorylated histone h2a
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1778.1780.........1790.........1800.........1810.........1820.. .......1830....... ..1840.........1850...
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Query Sequence  SQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASG. . IPCVSHVWVHDSCHA. . NQLQNYRNYLLPAGYS
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Template Sequence  EILNQLGIKIFDNIKETD. KLN. . . CIFAPKILRTEKFLKSLSFEPLKFALKPEFIIDLLKQIHQININLFDYEIN. . . G
Template Known Secondary structure  TT
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GGG.


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   855....860.........870.. ... ....880.........890.........900.........910.........920...... .
 
   1854.....1860.........1870....... ..1880.........1890.........1900... ......1910........ .1920.....
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Query Sequence  LEEQRILDWQPRENPFQNLKVLLV. . SDQQQNFLELWSEILMTGGAASVKQH. HSSAHNKDIALGVFD. . . . VVVTDPS.
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Template Sequence  INESIISKTKLPTKVFERANIRCINLVNDIPGGVDTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVIFKYVLIVTKASQ
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   935....940.........950.........960.........970.........980.........990.........1000.........1010....
 
   1926...1930.........1940.........1950.........1960........
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Query Sequence  . . . CPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHD
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Template Sequence  VKKFTKLINDRDKNETILIVEWNWCVESIFHLN. VDFTSKKNVLYQ
Template Known Secondary structure  STTS

TTS.

TT

TT
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   1022.......1030.........1040.........1050.... .....1060......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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