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Job Description | Q12888 | Confidence | 98.62% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 35 | Aligned Residues | 91 |
% Identity | 21% | Template | c3ef1A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain |
PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
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Resolution | 2.15 Å |
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1726 | . | . | . | 1730 | . | . | . | . | . | . | . | . | . | 1740 | . | . | . | . | . | . | . | . | . | 1750 | . | . | . | . | . | . | . | . | . | 1760 | . | . | . | . | . | . | . | . | . | 1770 | . | . | . | . | . | . | . | . | . | 1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . | 1800 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | T | L | F | L | G | Y | A | F | L | L | T | M | A | T | T | S | D | K | L | A | S | R | S | K | L | P | D | G | P | T | G | S | S | E | E | E | E | E | F | L | E | I | P | P | F | N | K | Q | Y | T | E | S | Q | L | R | A | G | A | G | Y | I | L | E | D | F | N | E | A | Q | C | N | T | A | Y | Q | C | L | L | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | K | V | L | K | G | C | R | L | L | F | S | G | V | I | P | . |
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L | G | V | D | V | L | S | S | D | I | A | K | W | A | M | S | F | G | A | E | V | V | L | D | F | S | V | P | . |
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P | T | H | L | I |
Template Known Secondary structure |   |
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| S | T | T | S |  |  |  |  |  |  |  | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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488 | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | |
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. | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | |
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1806 | . | . | . | 1810 | . | . | . | . | . | . | . | . | . | 1820 | . | |
. | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | D | Q | H | C | R | T | R | K | Y | F | L | C | L | A | S | . |
G | I | P | C | V | S | H | V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | R | N | Y | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | A | K | . |
I | R | T | E | K | V | K | K | A | V | S | M | G | N | I | K | V | V | K | L | N | W | L | T | E | S | L | S | Q | W | K | R | L | P | E | S | D | Y | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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537 | . | . | |
540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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