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Job Description | Q12888 | Confidence | 29.26% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 228 | Aligned Residues | 106 |
% Identity | 12% | Template | c1z3iX_ |
PDB info |
PDB header:recombination/dna binding | Chain: X: PDB Molecule:similar to rad54-like; |
PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54
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Resolution | 3.00 Å |
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1829 | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . | . | 1850 | . | . | . | . | . | . | . | . | . | 1860 | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | R | N | Y | L | L | P | A | G | Y | S | L | E | E | Q | R | I | L | D | . |
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W | Q | P | R | E | N | P | F | Q | N | L | K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | F | L | W | D | C | V | T | G | R | R | I | E | N | S | Y | G | C | I | M | A | D | E | M | G | L | . |
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K | V | I | V | V | S | P | S | S | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
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1895 | . | . | . | . | 1900 | . | . | . | . | . | . | . | . | |
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. | 1910 | . | . | . | . | . | . | . | . | . | 1920 | . | . | . | . | . | . | . | . | . | 1930 | . | . | . | . | . | . | . | . | . | 1940 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | A | A | S | V | K | Q | H | H | S | S | A | H | . |
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N | K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | C | P | A | S | V | L | K | C | A | E | A | L | Q | L | P | V | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | G | G | R | V | Q | P | V | A | I | D | G | G | S | K | D | E | I | D | S | K | L | V | N | F | I | S | Q | Q | G | M | R | I | P | T | P | I | L | I | I | S | Y | E | T | F | R | L | H | A | E | V | L | H | K | G | K | V | G | L | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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