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Job DescriptionQ12888
Confidence35.44%DateTue Apr 3 15:01:59 BST 2012
Rank209Aligned Residues122
% Identity14%Templatec2otcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine transcarbamoylase complexed with n-2 (phosphonacetyl)-l-ornithine
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1783......1790.........1800.........1810.........1820 .........1830.........1840.........1850.........1860
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Query Sequence  GAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLA. . SGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL
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Template Sequence  GARVTYLGPSGSQIGHKE. . . . . . . SIKDTARVLGRMYDGIQYRGYGQEIVETLAEY. . . . . . . . . . . . ARVPVWNGLTN
Template Known Secondary structure  T

TTTSSTTTTS.......

S
S
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S

S
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   70.........80....... ..90.........100.........110......... 120.........130
 
   1861... .....1870.........1880.........1890.........1900....
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Query Sequence  DWQP. . . . . . . . . . . . . . RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHH. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGG
Template Known Secondary structure  S

STT

GGG
S
TTS



GGG


TT
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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   1905....1910.........1920...
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Query Sequence  . . SSAHNKDIALGVFDVVVTD
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Template Sequence  NITLTEDVAKGVEGADFIYTD
Template Known Secondary structure  S
TT
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   211........220.........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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