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Job DescriptionQ12888
Confidence98.62%DateTue Apr 3 15:01:59 BST 2012
Rank35Aligned Residues91
% Identity21%Templatec3ef1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1726...1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800.....
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Query Sequence  KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI
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Template Sequence  QKVLKGCRLLFSGVIP. . . . . . . . . . . . . . . . . . . . . . . . . LGVDVLSSDIAKWAMSFGAEVVLDFSVP. . . . . . PTHLI
Template Known Secondary structure  TTSTT
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   488.490.........500... ......510.........520.........530. .....
 
   1806...1810.........1820. ........1830.........1840........
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Query Sequence  ADQHCRTRKYFLCLAS. GIPCVSHVWVHDSCHANQLQNYRNYLL
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Template Sequence  AAK. IRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL
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GGGTB
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   537.. 540.........550.........560.........570.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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