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Job DescriptionQ12888
Confidence99.01%DateTue Apr 3 15:01:59 BST 2012
Rank24Aligned Residues95
% Identity19%Templatec2e2wA_
PDB info PDB header:ligaseChain: A: PDB Molecule:dna ligase 4; PDBTitle: solution structure of the first brct domain of human dna2 ligase iv
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1725....1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800....
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Query Sequence  NKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLL
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Template Sequence  ISNIFEDVEFCVMS. . . . . . . . . . . . . . . . . . . . . . . . . . . . GTDSQPKPDLENRIAEFGGYIVQNPGPDT. . . . . . . YC
Template Known Secondary structure  S

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   910.........20.. .......30.........40.........50. ..
 
   1805....1810.........1820.........1830.........1840..... ....1850....
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Query Sequence  IADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRN. YLLPAGYSL
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Template Sequence  VIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPST
Template Known Secondary structure  SS

T
S

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   54.....60.........70.........80.........90.........100....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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