Job Description Q12888 Confidence 78.31% Date Tue Apr 3 15:01:59 BST 2012
Rank 111 Aligned Residues 95
% Identity 17% Template c2xznB_
PDB info
PDB header: ribosomeChain: B: PDB Molecule: rps0e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
Resolution 3.93 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
1847 . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
L L P A G Y S L E E Q R I L D W Q P R E N P F Q N L K .
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V L L V S D Q Q Q N F L E L W S E I L M T
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
L L A S N C H Q A T I N .
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L N N Q M K R Y I S H K G V N G I H Y I N I E E T W Q K I K L A A R V I A A V Q H P E D V M V V C S R I Y G Q R A A I K F A G Y T
Template Known Secondary structure  
T T T T S . . . G G G T T T S S S S S G G G S
Template Predicted Secondary structure  
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Template SS confidence  
   
13 . . . . . . 20 . . . .
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1895 . . . . 1900 . . . . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
G G A A S V K Q H H S S A .
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H N K D I A L G V F D .
V V V T D P S C P A S V L K C A E A L Q L P V V S Q
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                     
Template Sequence  
H C K S T S S S R W T P G T L T N Y Q T L K Y E E P R V L I V T D P R S D F Q A I K E A S Y V N I P V I A L
Template Known Secondary structure  
T B S S T T T T T T T S S S S T T T T T T T T
Template Predicted Secondary structure  
Template SS confidence  
   
90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]