Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence63.43%DateTue Apr 3 15:01:59 BST 2012
Rank143Aligned Residues83
% Identity20%Templatec3gt7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1871........1880.........1890.........1900.........1910.........1920....... ..1930....... ..1940.
Predicted Secondary structure 


































....
....

.
Query SS confidence 
























































. . . .









. . . .



.
Query Sequence  NLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCP. . . . ASVLKCAEAL. . . . QLPV.
Query Conservation                                                           ....          ....    .
Alig confidence 










.












































....









....



.
Template Conservation    






  .     
   
   
  
  
     
         



 
  
    
      

        


Template Sequence  AGEILIVEDSP. TQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVI
Template Known Secondary structure 


S
.TTT
SSTT


SS

SSS
STTTTTS
Template Predicted Secondary structure 




.




























Template SS confidence 















































































   11........20. ........30.........40.........50.........60.........70.........80.........
 
   1942.......1950....
Predicted Secondary structure  .....

Query SS confidence  . . . . .












Query Sequence  . . . . . VSQEWVIQCLIVG
Query Conservation  .....             
Alig confidence  .....












Template Conservation   

              
Template Sequence  LLTILSDPRDVVRSLECG
Template Known Secondary structure 


S
Template Predicted Secondary structure 







Template SS confidence 

















   90.........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions