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Job DescriptionQ12888
Confidence83.90%DateTue Apr 3 15:01:59 BST 2012
Rank91Aligned Residues94
% Identity23%Templatec1s1hB_
PDB info PDB header:ribosomeChain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
Resolution11.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   1847..1850.........1860.........1870... ......1880.........1890....
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Query Sequence  LLPAGYSLEEQRILDWQPRENPFQNLK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VLLVSDQQQNFLELWSEILMT
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Template Sequence  LLAANTHLGARN. . . VQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHT
Template Known Secondary structure  SGGGGTSS

SS...

GGGGGG
GGG

TTTT



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   16...20....... ..30.........40.........50.........60.........70.........80.........90..
 
   1895....1900....... ..1910........ .1920.........1930.........1940...
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Query Sequence  GGAASVKQHHSSA. . HNKDIALGVFD. VVVTDPSCPASVLKCAEALQLPVVS
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Template Sequence  GATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIA
Template Known Secondary structure  S


S


TTTTTTTTTS
S


SS
TTTTT

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   93......100.........110.........120.........130.........140....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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