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Job DescriptionQ12888
Confidence48.27%DateTue Apr 3 15:01:59 BST 2012
Rank178Aligned Residues122
% Identity12%Templatec3updA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1783......1790.........1800.........1810.........1820 .........1830.........1840.........1850.........1860
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Query Sequence  GAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLA. . SGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL
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Template Sequence  GAQVTYIGPSGSQIGDKE. . . . . . . SMKDTARVLGRMYDGIQYRGFGQAIVEELGAF. . . . . . . . . . . . AGVPVWNGLTD
Template Known Secondary structure  T



SS
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   72.......80......... 90.........100.........110.........120. ........130..
 
   1861... .....1870.........1880.........1890.........1900.....
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Query Sequence  DWQP. . . . . . . . . . . . . . RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHS. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGG
Template Known Secondary structure  S

TSSS

GGG
S

SSTT
S
GGGS

T
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   1906...1910.........1920...
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Query Sequence  . . . SAHNKDIALGVFDVVVTD
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Template Sequence  KITLTENVAEGVQGCDFLYTD
Template Known Secondary structure  S
TT
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   213......220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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