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Job Description | Q12888 | Confidence | 97.95% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 45 | Aligned Residues | 107 |
% Identity | 17% | Template | c2dunA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dna polymerase mu; |
PDBTitle: solution structure of brct domain of dna polymerase mu
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Resolution | UNK |
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1726 | . | . | . | 1730 | . | . | . | . | . | . | . | . | . | 1740 | . | . | . | . | . | . | . | . | . | 1750 | . | . | . | . | . | . | . | . | . | 1760 | . | . | . | . | . | . | . | . | . | 1770 | . | . | . | . | . | . | . | . | . | 1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . | 1800 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | T | L | F | L | G | Y | A | F | L | L | T | M | A | T | T | S | D | K | L | A | S | R | S | K | L | P | D | G | P | T | G | S | S | E | E | E | E | E | F | L | E | I | P | P | F | N | K | Q | Y | T | E | S | Q | L | R | A | G | A | G | Y | I | L | E | D | F | N | E | A | Q | C | N | T | A | Y | Q | C | L | L | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | T | R | F | P | G | V | A | I | Y | L | V | E | P | . |
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R | M | G | R | S | R | R | A | F | L | T | G | L | A | R | S | K | G | F | R | V | L | D | A | C | S | S | E | A | . |
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T | H | V | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
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. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
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1806 | . | . | . | 1810 | |
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. | . | . | . | . | . | . | . | . | 1820 | . | . | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | |
. | . | . | . | . | . | 1850 | . | . | . | . | . | . | . | . | . | 1860 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | D | Q | H | C | . |
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R | T | R | K | Y | F | L | C | L | A | S | G | I | P | C | V | S | H | V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | . |
R | N | Y | L | L | P | A | G | Y | S | L | E | E | Q | R | I | L | D | W | Q | P | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | E | E | T | S | A | E | E | A | V | S | W | Q | E | R | R | M | A | A | A | P | P | G | C | T | P | P | A | L | L | D | I | S | W | L | T | E | S | L | G | A | G | Q | P | V | P | V | E | C | R | H | R | L | E | V | A | G | P | R | K | G | P | L | S | P | A | W | M | P | A |
Template Known Secondary structure |   |
 | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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