 |
Job Description | Q12888 | Confidence | 75.13% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 117 | Aligned Residues | 55 |
% Identity | 25% | Template | c3c3wB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; |
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr
|
Resolution | 2.20 Å |
|
 |
  |   |
1872 | . | . | . | . | . | . | . | 1880 | . | . | . | . | . | . | . | . | . | 1890 | . | . | . | . | . | |
. | . | . | . | 1900 | . | . | . | . | . | . | . | . | |
. | 1910 | . | . | . | . | . | . | . | . | . | 1920 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T | G | . |
G | A | A | S | V | K | Q | H | H | S | S | A | H | . |
N | K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | C | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |   | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |
Template Sequence |   |
V | K | V | F | L | V | D | D | H | E | . |
V | V | R | R | G | L | V | D | L | L | G | A | D | P | E | L | D | V | V | G | E | A | G | S | V | A | E | A | M | A | R | V | P | A | A | R | P | D | V | A | V | L | D | V | R | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |
|  | . |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
| S |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|