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Job Description | Q12888 | Confidence | 49.17% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 173 | Aligned Residues | 86 |
% Identity | 12% | Template | c3eagA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- |
PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides
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Resolution | 2.55 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
N | P | F | Q | N | L | K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T | G | G | A | A | S | V | K | Q | H | H | S | S | A | H | N | K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | . |
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C | P | A | S | V | L | K | C | A | E | A | L | Q | L | P | V | V | S | . |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | I | A | K | E | A | G | F | E | V | S | G | C | D | A | K | X | Y | P | P | X | S | T | Q | L | E | A | L | G | I | D | V | Y | E | G | F | D | A | A | Q | . |
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L | D | E | F | K | A | D | V | Y | V | I | G | N | V | A | K | R | G | X | D | V | V | E | A | I | L | N | L | G | L | P | Y | I | S | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
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. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
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1944 | . | . | . | . | . | 1950 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | E | W | V | I | Q | C | L | I | V | G | E | R | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | Q | W | L | S | E | N | V | L | H | H | H | W | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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