Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence97.20%DateTue Apr 3 15:01:59 BST 2012
Rank49Aligned Residues90
% Identity22%Templatec2l42A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:dna-binding protein rap1; PDBTitle: the solution structure of rap1 brct domain from saccharomyces2 cerevisiae
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1723......1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800..
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Query Sequence  PLNKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQC
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Template Sequence  QVSGPPLSNMKFYLNRDADAHDSL. . . . . . . . . . . . . . . . . . . . . . . . NDIDQLARLIRANGGEVLDSKPRESKENV. . .
Template Known Secondary structure  S
SS
SS



B

SSS
SS
S........................STTTTS







SS

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   5....10.........20........ .30.........40.........50.......
 
   1803......1810.........1820.........1830.........1840.........
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Query Sequence  LLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLP
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Template Sequence  . FIVSPYNHT. . . . . . . . . NLPTVTPTYIKACCQSNSLLNMENYLVP
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B
TT


.........SSSB

TTSTTS
GGGG

B
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   58.60...... ...70.........80.........90....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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