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Job DescriptionQ12888
Confidence98.49%DateTue Apr 3 15:01:59 BST 2012
Rank39Aligned Residues88
% Identity11%Templatec2jw5A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:dna polymerase lambda; PDBTitle: polymerase lambda brct domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1728.1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800.......
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Query Sequence  LFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIAD
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Template Sequence  WLSSLRAHVVRTGIGR. . . . . . . . . . . . . . . . . . . . . . . . . . . ARAELFEKQIVQHGGQLCPAQGPGV. . . . . . THIVVD
Template Known Secondary structure 
GGGS


B
TTT

S...........................SSTTTT



STT
TT
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   40.........50..... ....60.........70.........80 ......
 
   1808.1810.........1820. ........1830.........1840........
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Query Sequence  QHCRTRKYFLCLAS. . . . . GIPCVSHVWVHDSCHANQLQNYRNYLL
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Template Sequence  EGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVAGFSI
Template Known Secondary structure  SSS
TT
SS

SS
T
S


GGGTB
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   87..90.........100.........110.........120.........130..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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