Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence84.01%DateTue Apr 3 15:01:59 BST 2012
Rank90Aligned Residues49
% Identity24%Templatec3mp6A_
PDB info PDB header:histone binding proteinChain: A: PDB Molecule:maltose-binding periplasmic protein, linker, saga- PDBTitle: complex structure of sgf29 and dimethylated h3k4
Resolution1.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1487..1490.........1500.........1510.........1520.........1530.....
Predicted Secondary structure 




































Query SS confidence 
















































Query Sequence  VGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLC
Query Conservation   
 

                                            
Alig confidence 
















































Template Conservation                                                   
Template Sequence  PGTKVLARYPETTTFYPAIVIGTKRDGTCRLRFDGEKETEVTRRLVLPS
Template Known Secondary structure  TT

TT
S
TTS
TT



GGG
Template Predicted Secondary structure 























Template SS confidence 
















































   1197..1200.........1210.........1220.........1230.........1240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions