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Job Description | Q12888 | Confidence | 95.70% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 54 | Aligned Residues | 56 |
% Identity | 25% | Template | c4a4fA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:survival of motor neuron-related-splicing factor 30; |
PDBTitle: solution structure of spf30 tudor domain in complex with2 symmetrically dimethylated arginine
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Resolution | UNK |
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1478 | . | 1480 | . | . | . | . | . | . | |
. | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | . | |
. | 1510 | . | . | . | . | . | . | . | . | . | |
1520 | . | . | . | . | . | . | . | . | . | 1530 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | A | S | S | P | G | N | S | F | . |
V | G | L | R | V | V | A | K | W | S | S | N | G | Y | F | Y | S | G | K | I | T | R | . |
D | V | G | A | G | K | Y | K | L | L | F | . |
D | D | G | Y | E | C | D | V | L | G | K | D | I | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | S | T | Q | P | T | H | S | W | K | V | G | D | K | C | M | A | V | W | S | E | D | G | Q | C | Y | E | A | E | I | E | E | I | D | E | E | N | G | T | A | A | I | T | F | A | G | Y | G | N | A | E | V | T | P | L | L | N | L | K |
Template Known Secondary structure |   |
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| T | T | T | S | S |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | G | G | G |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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