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Job Description | Q12888 | Confidence | 90.14% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 69 | Aligned Residues | 95 |
% Identity | 23% | Template | c3izbA_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); |
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
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Resolution | NULL Å |
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1847 | . | . | 1850 | . | . | . | . | . | . | . | . | . | 1860 | . | . | . | . | . | . | . | . | . | 1870 | . | . | . | |
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. | . | . | . | . | . | 1880 | . | . | . | . | . | . | . | . | . | 1890 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | L | P | A | G | Y | S | L | E | E | Q | R | I | L | D | W | Q | P | R | E | N | P | F | Q | N | L | K | . |
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V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | A | A | N | T | H | L | G | A | R | N | . |
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V | Q | V | H | Q | E | P | Y | V | F | N | A | R | P | D | G | V | H | V | I | N | V | G | K | T | W | E | K | L | V | L | A | A | R | I | I | A | A | I | P | N | P | E | D | V | V | A | I | S | S | R | T | F | G | Q | R | A | V | L | K | F | A | A | H | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | |
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. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
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1895 | . | . | . | . | 1900 | . | . | . | . | . | . | . | |
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. | 1920 | . | . | . | . | . | . | . | . | . | 1930 | . | . | . | . | . | . | . | . | . | 1940 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | A | A | S | V | K | Q | H | H | S | S | A | . |
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H | N | K | D | I | A | L | G | V | F | D | . |
V | V | V | T | D | P | S | C | P | A | S | V | L | K | C | A | E | A | L | Q | L | P | V | V | S | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | A | T | P | I | A | G | R | F | T | P | G | S | F | T | N | Y | I | T | R | S | F | K | E | P | R | L | V | I | V | T | D | P | R | S | D | A | Q | A | I | K | E | A | S | Y | V | N | I | P | V | I | A | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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