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Job DescriptionQ12888
Confidence32.24%DateTue Apr 3 15:01:59 BST 2012
Rank219Aligned Residues122
% Identity19%Templatec1ortD_
PDB info PDB header:transferaseChain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1783......1790.........1800.........1810.........1820 .........1830.........1840.........1850.........1860
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Query Sequence  GAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLA. . SGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL
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Template Sequence  GANVTYIDPNSSQIGHKE. . . . . . . SMKDTARVLGRMYDAIGYRGFKQEIVEELAKF. . . . . . . . . . . . AGVPVFNGLTD
Template Known Secondary structure  T

STT

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S
S
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S
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   71........80........ .90.........100.........110.........120 .........130.
 
   1861... .....1870.........1880.........1890.........1900......
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Query Sequence  DWQP. . . . . . . . . . . . . RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSS. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAK
Template Known Secondary structure  S


S
GGG
S
S
STT


GGGS

TT
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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   1907..1910.........1920...
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Query Sequence  . . . AHNKDIALGVFDVVVTD
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Template Sequence  LTLTEDPKEAVKGVDFVHTD
Template Known Secondary structure  S
TTT
S


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   212.......220.........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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