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Job Description | Q12888 | Confidence | 98.81% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 31 | Aligned Residues | 87 |
% Identity | 18% | Template | c3l3eA_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; |
PDBTitle: crystal structure of the sixth brct domain of human topbp1
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Resolution | 1.26 Å |
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1727 | . | . | 1730 | . | . | . | . | . | . | . | . | . | 1740 | . | . | . | . | . | . | . | . | . | 1750 | . | . | . | . | . | . | . | . | . | 1760 | . | . | . | . | . | . | . | . | . | 1770 | . | . | . | . | . | . | . | . | . | 1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . | 1800 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | L | F | L | G | Y | A | F | L | L | T | M | A | T | T | S | D | K | L | A | S | R | S | K | L | P | D | G | P | T | G | S | S | E | E | E | E | E | F | L | E | I | P | P | F | N | K | Q | Y | T | E | S | Q | L | R | A | G | A | G | Y | I | L | E | D | F | N | E | A | Q | C | N | T | A | Y | Q | C | L | L | I | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | P | L | H | K | V | V | V | C | V | S | . |
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K | K | L | S | K | K | Q | S | E | L | N | G | I | A | A | S | L | G | A | D | Y | R | R | S | F | D | E | T | V | . |
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T | H | F | I | Y |
Template Known Secondary structure |   |
| T | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | |
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. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
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1807 | . | . | 1810 | |
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. | . | . | . | . | . | . | . | . | 1820 | . | . | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | Q | H | C | . |
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R | T | R | K | Y | F | L | C | L | A | S | G | I | P | C | V | S | H | V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | R | N | Y | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | G | R | P | N | D | T | N | R | E | Y | K | S | V | K | E | R | G | V | H | I | V | S | E | H | W | L | L | D | C | A | Q | E | C | K | H | L | P | E | S | L | Y | P | H |
Template Known Secondary structure |   |
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| G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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