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Job DescriptionQ12888
Confidence20.01%DateTue Apr 3 15:01:59 BST 2012
Rank282Aligned Residues48
% Identity23%Templatec2l89A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:pwwp domain-containing protein 1; PDBTitle: solution structure of pdp1 pwwp domain reveals its unique binding2 sites for methylated h4k20 and dna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1487..1490.........1500...... ...1510......... 1520.........1530.....
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Query Sequence  VGLRVVAKWSSNGYFYSGKI. . . . . . . . . . . TRDVGAGKYKLLF. DDGYECDVLGKDILLC
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Template Sequence  FGDRILVKAPGYPWW. PALLLRRKETKDSLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPL
Template Known Secondary structure  TT
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TTTT
GGG
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   52.......60...... ...70.........80.........90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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