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Job DescriptionQ12888
Confidence99.92%DateTue Apr 3 15:01:59 BST 2012
Rank6Aligned Residues197
% Identity17%Templatec3l40A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:brct-containing protein 1; PDBTitle: crystal structure of s. pombe brc1 brct5-brct6 domains
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1724.....1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800...
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Query Sequence  LNKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCL
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Template Sequence  TNAKASKRVYITFTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YDKKPSIDNLKKLDMSITSNPSKCT. . . . . . . H
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   659660.........670... ......680.........690........ .
 
   1804.....1810.........1820.........1830.........1840.........1850 .........1860.........1870......
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Query Sequence  LIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPA. . . . . . . GYSLEEQRILDWQPRENPFQNLKVLL
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Template Sequence  LIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYLLNDPEKELELGCTLESALKRARAQGPSLLEDYVVYL
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SGGG


TS


SGGGB


TS

S
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   700.........710.........720.........730.........740.........750.........760.........770.........
 
   1877.. 1880.........1890.........1900.........1910.........1920..... ....1930.........1940.........1950.
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Query Sequence  VSD. QQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPS. . . . CPASVLKCAEALQLPVVSQEWVIQCL
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Template Sequence  TSKTVAPENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNASQNKTIFLQNYDWLIKTV
Template Known Secondary structure  TTSS
GGGTT








GGGGGG
TT
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   780.........790.........800.........810.........820.........830.........840.........850.........
 
   1952.......1960
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Query Sequence  IVGERIGFK
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Template Sequence  LRQ. EIDVN
Template Known Secondary structure  T.


TT
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   860.. .....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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