Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence47.73%DateTue Apr 3 15:01:59 BST 2012
Rank182Aligned Residues142
% Identity13%Templatec3hbmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1802.......1810.........1820. ........1830.........1840.........1850.........1860.........1870.........
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Query Sequence  CLLIADQHCRTRKYFLCLAS. . GIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRILDWQPRENPFQNLKVLLVSD
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Template Sequence  ELLIIDHYGISVDDEKLIKLETGVKIL. . . . . . . SFDDEIKPHHCDILLNVNAYAKASDYEGLVPKCEVRCGFSYALI. .
Template Known Secondary structure  S
TT



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STT

GGGGTTT



SGGG


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   71........80.........90....... ..100.........110.........120.........130.........140.
 
   1880.........1890 .........1900.........1910.........1920.........1930.........1940....... ..1950
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Query Sequence  QQQNFLELWSE. . . . . . . ILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWV. . IQC
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Template Sequence  . REEFYQEAKENRKKKYDFFICXGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAK
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TT







S

TT
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TTS

TT
TTT
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S
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   143......150.........160.........170.........180.........190.........200.........210.........220.
 
   1951..
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Query Sequence  LIV
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Template Sequence  LXN
Template Known Secondary structure 
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   222..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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