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Job DescriptionQ12888
Confidence97.95%DateTue Apr 3 15:01:59 BST 2012
Rank45Aligned Residues107
% Identity17%Templatec2dunA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna polymerase mu; PDBTitle: solution structure of brct domain of dna polymerase mu
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1726...1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800.....
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Query Sequence  KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI
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Template Sequence  STRFPGVAIYLVEP. . . . . . . . . . . . . . . . . . . . . . . . . . . RMGRSRRAFLTGLARSKGFRVLDACSSEA. . . . . . THVV
Template Known Secondary structure  S
S
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ST
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   8.10.........20. ........30.........40.........50 ....
 
   1806...1810 .........1820.........1830.........1840... ......1850.........1860.....
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Query Sequence  ADQHC. . . . . . . . . RTRKYFLCLASGIPCVSHVWVHDSCHANQLQNY. RNYLLPAGYSLEEQRILDWQPR
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Template Sequence  MEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHRLEVAGPRKGPLSPAWMPA
Template Known Secondary structure  SS

S
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   55....60.........70.........80.........90.........100.........110.........120....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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