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Job Description | Q12888 | Confidence | 66.72% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 137 | Aligned Residues | 87 |
% Identity | 18% | Template | c3eq2A_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:probable two-component response regulator; |
PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb
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Resolution | 3.40 Å |
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1871 | . | . | . | . | . | . | . | . | 1880 | . | . | . | . | . | . | . | . | . | 1890 | . | . | . | . | . | . | . | . | . | 1900 | . | . | . | . | . | . | . | . | . | |
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1910 | . | . | . | . | . | . | . | . | . | 1920 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | L | K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T | G | G | A | A | S | V | K | Q | H | H | S | S | A | H | N | . |
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K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | C | P | . |
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A | S | V | L | K | C | A | E | A | . |
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L | Q | L | P | V | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | A | T | L | L | I | I | D | D | D | E | . |
V | V | R | E | S | L | A | A | Y | L | E | D | S | N | F | K | V | L | Q | A | . |
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L | N | G | L | Q | G | L | Q | I | F | E | S | E | Q | P | D | L | V | I | C | D | L | R | X | P | Q | I | D | G | L | E | L | I | R | R | I | R | Q | T | A | S | E | T | P | I | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | . | . | . | . | . | |
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. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
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1943 | . | . | . | . | . | . | 1950 | . | . | . | . | . | . | . | . | . | 1960 | . | . | . | . | . | . | . | . | . | 1970 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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S | Q | E | W | V | I | Q | C | L | I | V | G | E | R | I | G | F | K | Q | H | P | K | Y | K | H | D | Y | V | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | L | G | V | X | S | D | A | V | E | A | L | R | L | G | . |
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A | A | D | Y | L | I |
Template Known Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
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. | . | . | 100 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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