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Job DescriptionQ12888
Confidence99.84%DateTue Apr 3 15:01:59 BST 2012
Rank13Aligned Residues184
% Identity17%Templatec1y98A_
PDB info PDB header:antitumor proteinChain: A: PDB Molecule:breast cancer type 1 susceptibility protein; PDBTitle: structure of the brct repeats of brca1 bound to a ctip2 phosphopeptide.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1772.......1780.........1790.........1800........ .1810.........1820.........1830.........1840......
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Query Sequence  NKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIADQ. . . . . HCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNY
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Template Sequence  EFMLVYKFARKHHITLTNLITE. . . . . . ETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDF
Template Known Secondary structure  TT

SS

S......S


B
TTS


TT
TTS


GGGT
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   1661........1670.........1680.. .......1690.........1700.........1710.........1720.........1730....
 
   1847. .1850.........1860.........1870.........1880.........1890.........1900.........1910.........1920..
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Query Sequence  LL. . . . PAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVT
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Template Sequence  EVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKE. LSSFTLGTGVHPIVVVQPD
Template Known Secondary structure  B

TTTBSS


SSS
TTTT
S

SSS
TT


S.GGG


SSS

GG
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   1735....1740.........1750.........1760.........1770.........1780.........1790.... .....1800.........1810...
 
   1923......1930.........1940.........1950.........1960..
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Query Sequence  DPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQH
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Template Sequence  AWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTY
Template Known Secondary structure  G
SS
SGGGTTGGG
S

TTTS


GGGG
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   1814.....1820.........1830.........1840.........1850...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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