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Job Description | Q12888 | Confidence | 53.93% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 161 | Aligned Residues | 88 |
% Identity | 14% | Template | c2qr3A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:two-component system response regulator; |
PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis
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Resolution | 1.80 Å |
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1873 | . | . | . | . | . | . | 1880 | . | . | . | . | . | . | . | . | . | 1890 | . | . | . | . | . | . | . | . | . | 1900 | . | . | . | . | . | . | . | . | . | 1910 | . | . | . | . | . | . | . | . | . | 1920 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T | G | G | A | A | S | V | K | Q | H | H | S | S | A | H | N | K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | C | P | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | I | I | I | V | D | D | N | K | . |
G | V | L | T | A | V | Q | L | L | L | K | N | H | F | S | K | V | I | T | L | S | S | P | V | S | L | S | T | V | L | R | E | E | N | P | E | V | V | L | L | D | M | N | F | T | S | N | E | G | L | F | W | L | H | E | I | K | R | Q | Y | R | D | L | P | V | V | L | F | T | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
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1945 | . | . | . | . | 1950 | . | . | . | . | . | . | . | . | . | 1960 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | W | V | I | Q | C | L | I | V | G | E | R | I | G | F | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | A | D | I | D | L | A | V | R | G | I | K | E | G | A | S | D |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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