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Job Description | Q12888 | Confidence | 20.01% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 282 | Aligned Residues | 48 |
% Identity | 23% | Template | c2l89A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:pwwp domain-containing protein 1; |
PDBTitle: solution structure of pdp1 pwwp domain reveals its unique binding2 sites for methylated h4k20 and dna
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Resolution | UNK |
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1487 | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | |
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1520 | . | . | . | . | . | . | . | . | . | 1530 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | G | L | R | V | V | A | K | W | S | S | N | G | Y | F | Y | S | G | K | I | . |
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T | R | D | V | G | A | G | K | Y | K | L | L | F | . |
D | D | G | Y | E | C | D | V | L | G | K | D | I | L | L | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | G | D | R | I | L | V | K | A | P | G | Y | P | W | W | . |
P | A | L | L | L | R | R | K | E | T | K | D | S | L | N | T | N | S | S | F | N | V | L | Y | K | V | L | F | F | P | D | F | N | F | A | W | V | K | R | N | S | V | K | P | L |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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