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Job Description | Q12888 | Confidence | 97.45% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 48 | Aligned Residues | 103 |
% Identity | 17% | Template | c2coeA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:deoxynucleotidyltransferase, terminal variant; |
PDBTitle: solution structure of brct domain of terminal2 deoxynucleotidyltransferase
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Resolution | UNK |
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1850 | . | . | . | . | . | . | . | . | . | 1860 | . | . | . | . | . | . | . | . | . | 1870 | . | . | . | . | . | . | . | . | . | 1880 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | G | Y | S | L | E | E | Q | R | I | L | D | W | Q | P | R | E | N | P | F | Q | N | L | K | V | L | L | V | S | D | Q | Q | Q | . |
N | F | L | E | L | W | S | E | I | L | M | T | G | G | A | A | S | V | K | Q | H | H | S | S | A | H | N | K | D | I | A | L | G | V | F | D | V | V | V | T | D | P | S | C | P | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | G | S | S | G | . |
T | G | A | L | M | A | S | S | P | Q | D | I | K | F | Q | D | L | V | V | F | I | L | E | K | K | M | G | T | T | R | R | A | L | L | M | E | L | A | R | R | K | G | F | R | V | E | N | E | . |
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L | S | D | S | V | T | H | I | V | A | E | N | N | S | G | S | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | |
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
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. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
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1929 | 1930 | . | . | . | . | . | . | . | |
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. | . | 1940 | . | . | . | . | . | . | . | . | . | 1950 | . | . | . | . | . | . | . | . | . | 1960 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | V | L | K | C | A | E | A | L | . |
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Q | L | P | V | V | S | Q | E | W | V | I | Q | C | L | I | V | G | E | R | I | G | F | K | Q | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | L | E | W | L | Q | A | Q | K | V | Q | V | S | S | Q | P | E | L | L | D | V | S | W | L | I | E | C | I | G | A | G | K | P | V | E | M | T | G | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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