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Job Description | Q12888 | Confidence | 98.90% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 26 | Aligned Residues | 96 |
% Identity | 26% | Template | c2xdpA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:lysine-specific demethylase 4c; |
PDBTitle: crystal structure of the tudor domain of human jmjd2c
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Resolution | 1.56 Å |
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1487 | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | . | . | 1510 | . | . | . | . | . | . | . | . | . | 1520 | . | . | . | |
. | . | . | . | . | . | 1530 | . | . | . | . | . | . | |
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. | . | . | 1540 | . | . | . | . | . | . | . | . | . | 1550 | . | . | . | . | . | . | . | . | . | 1560 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | G | L | R | V | V | A | K | W | S | S | N | G | Y | F | Y | S | G | K | I | T | R | D | V | G | A | G | K | Y | K | L | L | F | D | D | G | Y | . |
E | C | D | V | L | G | K | D | I | L | L | C | D | . |
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P | I | P | L | D | T | E | V | T | A | L | S | E | D | E | Y | F | S | A | G | V | V | K | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | G | Q | T | V | I | T | K | H | . |
R | N | T | R | Y | Y | S | C | R | V | M | A | V | T | S | Q | T | F | Y | E | V | M | F | D | D | G | S | F | S | R | D | T | F | P | E | D | I | V | S | R | D | C | L | K | L | G | P | P | A | E | G | E | V | V | Q | V | K | W | P | D | G | K | L | Y | G | A | K | Y | F | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
881 | . | . | . | . | . | . | . | . | |
890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . |
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1561 | . | . | . | . | . | . | . | . | 1570 | . | . | . | |
. | . | . | . | . | . | 1580 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | R | K | E | S | G | E | L | Y | Y | S | I | E | . |
K | E | G | Q | R | K | W | Y | K | R | M | A | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | N | I | A | H | . |
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M | Y | Q | V | E | F | E | D | G | S | Q | I | A | M | K | R | E | D | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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960 | . | . | . | . | |
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. | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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