Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence95.70%DateTue Apr 3 15:01:59 BST 2012
Rank54Aligned Residues56
% Identity25%Templatec4a4fA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:survival of motor neuron-related-splicing factor 30; PDBTitle: solution structure of spf30 tudor domain in complex with2 symmetrically dimethylated arginine
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1478.1480...... ...1490.........1500........ .1510......... 1520.........1530...
Predicted Secondary structure 








.

















.










.







Query SS confidence 








.





















.










.













Query Sequence  DASSPGNSF. VGLRVVAKWSSNGYFYSGKITR. DVGAGKYKLLF. DDGYECDVLGKDIL
Query Conservation    
    
 . 
 

                 .           .              
Alig confidence 








.





















.










.













Template Conservation   

 
     

  
 
    
  



 
  
        
 





 
 
    

Template Sequence  ASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLK
Template Known Secondary structure 

S

SS


TT

TTTSSTTTTTTTTGGG
Template Predicted Secondary structure 
























Template SS confidence 


























































   65....70.........80.........90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions