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Job Description | Q12888 | Confidence | 53.12% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 164 | Aligned Residues | 74 |
% Identity | 14% | Template | c3iz6A_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); |
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
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Resolution | 5.50 Å |
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1870 | . | . | . | . | . | . | . | . | . | 1880 | . | . | . | . | . | . | . | . | . | 1890 | . | . | . | . | . | . | . | . | . | 1900 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | N | L | K | V | L | L | V | S | D | Q | Q | Q | N | F | L | E | L | W | S | E | I | L | M | T | G | G | A | A | S | V | K | Q | H | H | S | S | A | . |
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H | N | K | D | I | A | L | G | V | F | D | . |
V | V | V | T | D | P | S | C | P | A | S | V | L | K | C | A | E | A | L | Q | L | P | V | V | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | Q | D | I | I | V | Q | S | A | R | P | Y | G | Q | R | A | V | L | K | F | A | Q | Y | T | G | A | H | A | I | A | G | R | H | T | P | G | T | F | T | N | Q | L | Q | T | S | F | S | E | P | R | L | L | I | L | T | D | P | R | T | D | H | Q | P | I | K | E | S | A | L | G | N | I | P | T | I | A |
Template Known Secondary structure |   |
S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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