 |
Job Description | Q12888 | Confidence | 94.77% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 56 | Aligned Residues | 47 |
% Identity | 26% | Template | c1g5vA_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:survival motor neuron protein 1; |
PDBTitle: solution structure of the tudor domain of the human smn2 protein
|
Resolution | UNK |
|
  |   |
1487 | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | . | |
. | 1510 | . | . | . | . | . | . | . | . | . | 1520 | . | |
. | . | . | . | . | . | . | . | 1530 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | L | R | V | V | A | K | W | S | S | N | G | Y | F | Y | S | G | K | I | T | R | . |
D | V | G | A | G | K | Y | K | L | L | F | D | D | . |
G | Y | E | C | D | V | L | G | K | D | I | L |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |
Template Sequence |   |
V | G | D | K | C | S | A | I | W | S | E | D | G | C | I | Y | P | A | T | I | A | S | I | D | F | K | R | E | T | C | V | V | V | Y | T | G | Y | G | N | R | E | E | Q | N | L | S | D | L | L |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | G | G | G |
| B |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|