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Job DescriptionQ12888
Confidence47.28%DateTue Apr 3 15:01:59 BST 2012
Rank184Aligned Residues122
% Identity22%Templatec1vlvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase (tm1097) from2 thermotoga maritima at 2.25 a resolution
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1783......1790.........1800.........1810.........1820 .........1830.........1840.........1850.........1860
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Query Sequence  GAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLA. . SGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL
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Template Sequence  GGHPIFLSPNDIHLGAKE. . . . . . . SLEDTARVLGRMVDAIMFRGYKQETVEKLAEY. . . . . . . . . . . . SGVPVYNGLTD
Template Known Secondary structure  T

TTT

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TT
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S
S

S
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   72.......80......... 90.........100.........110.........120. ........130..
 
   1861... .....1870.........1880.........1890.........1900......
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Query Sequence  DWQP. . . . . . . . . . . . RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSS. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSV
Template Known Secondary structure  S

S
STT
S
TTSTT
S
GGG




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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   1907..1910.........1920...
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Query Sequence  . . AHNKDIALGVFDVVVTD
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Template Sequence  SFTSNLEEALAGADVVYTD
Template Known Secondary structure  S
TT
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   213......220.........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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