Return to main results Retrieve Phyre Job Id

Job DescriptionQ12888
Confidence24.47%DateTue Apr 3 15:01:59 BST 2012
Rank251Aligned Residues105
% Identity14%Templatec2w37A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic; PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1783......1790....... ..1800.........1810.........1820.........1830.........1840.........1850
Predicted Secondary structure 




............
















Query SS confidence 














. . . . . . . . . . . .




















































Query Sequence  GAGYILEDFNEAQCN. . . . . . . . . . . . TAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPA
Query Conservation                 ............      

     

 

   
    
     
                    
Alig confidence 














............





























.





















Template Conservation 

    
    

  



  

  


 
 
 

 
          
  
 




.
 
   








 

 
  
Template Sequence  GAHPEYLGQNDIQLGKKESTSDTAKVLGSMFDGIEFRGFKQSDAEILARDSGVPVWN. GLTDEWHPTQMLADFMTVKENF
Template Known Secondary structure  T

TTT

TTTSS

SSS
SSS
.
SS

Template Predicted Secondary structure 






















.









Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130... ......140.........150.....
 
   1851........1860.........1870.........1880.........1890.........1900....
Predicted Secondary structure 



































Query SS confidence 





















































Query Sequence  GYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHH
Query Conservation                                                        
Alig confidence 
................




































Template Conservation 
................ 
 

 

 


   

  

       
  
 
  
Template Sequence  G. . . . . . . . . . . . . . . . KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAP
Template Known Secondary structure  S................

TT
S
TTST


Template Predicted Secondary structure 
................














Template SS confidence 





















































   156 ...160.........170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions