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Job DescriptionQ12888
Confidence98.81%DateTue Apr 3 15:01:59 BST 2012
Rank31Aligned Residues87
% Identity18%Templatec3l3eA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; PDBTitle: crystal structure of the sixth brct domain of human topbp1
Resolution1.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1727..1730.........1740.........1750.........1760.........1770.........1780.........1790.........1800......
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Query Sequence  TLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLIA
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Template Sequence  KPLHKVVVCVS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKLSKKQSELNGIAASLGADYRRSFDETV. . . . . . THFIY
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   14.....20.... .....30.........40.........50... .....
 
   1807..1810 .........1820.........1830.........1840........
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Query Sequence  DQHC. . RTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLL
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Template Sequence  QGRPNDTNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLYPH
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   5960.........70.........80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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