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Job DescriptionQ12888
Confidence49.17%DateTue Apr 3 15:01:59 BST 2012
Rank173Aligned Residues86
% Identity12%Templatec3eagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1867..1870.........1880.........1890.........1900.........1910.........1920..... ....1930.........1940...
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Query Sequence  NPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPS. . CPASVLKCAEALQLPVVS.
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Template Sequence  AIAKEAGFEVSGCDAKXYPPXSTQLEALGIDVYEGFDAAQ. . . . . LDEFKADVYVIGNVAKRGXDVVEAILNLGLPYISG
Template Known Secondary structure  TT
SS

TTTT
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GGG.....GGS


S
TT

TT
TT

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   1920.........30.........40.........50........ .60.........70.........80.........90...
 
   1944.....1950.......
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Query Sequence  QEWVIQCLIVGERI
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Template Conservation   
            
Template Sequence  PQWLSENVLHHHWV
Template Known Secondary structure  TGGGS
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   94.....100.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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