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Job Description | Q12888 | Confidence | 99.01% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 24 | Aligned Residues | 95 |
% Identity | 19% | Template | c2e2wA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:dna ligase 4; |
PDBTitle: solution structure of the first brct domain of human dna2 ligase iv
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Resolution | UNK |
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1725 | . | . | . | . | 1730 | . | . | . | . | . | . | . | . | . | 1740 | . | . | . | . | . | . | . | . | . | 1750 | . | . | . | . | . | . | . | . | . | 1760 | . | . | . | . | . | . | . | . | . | 1770 | . | . | . | . | . | . | . | . | . | 1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . | 1800 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | K | T | L | F | L | G | Y | A | F | L | L | T | M | A | T | T | S | D | K | L | A | S | R | S | K | L | P | D | G | P | T | G | S | S | E | E | E | E | E | F | L | E | I | P | P | F | N | K | Q | Y | T | E | S | Q | L | R | A | G | A | G | Y | I | L | E | D | F | N | E | A | Q | C | N | T | A | Y | Q | C | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | S | N | I | F | E | D | V | E | F | C | V | M | S | . |
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G | T | D | S | Q | P | K | P | D | L | E | N | R | I | A | E | F | G | G | Y | I | V | Q | N | P | G | P | D | T | . |
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Y | C |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
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. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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1805 | . | . | . | . | 1810 | . | . | . | . | . | . | . | . | . | 1820 | . | . | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | |
. | . | . | . | 1850 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | A | D | Q | H | C | R | T | R | K | Y | F | L | C | L | A | S | G | I | P | C | V | S | H | V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | R | N | . |
Y | L | L | P | A | G | Y | S | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | I | A | G | S | E | N | I | R | V | K | N | I | I | L | S | N | K | H | D | V | V | K | P | A | W | L | L | E | C | F | K | T | K | S | F | V | P | W | Q | P | R | F | M | I | H | M | C | P | S | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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