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Job DescriptionQ12888
Confidence20.84%DateTue Apr 3 15:01:59 BST 2012
Rank279Aligned Residues151
% Identity9%Templatec3ez6B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1775....1780. ........1790.........1800.........1810.........1820.........1830.........1840.......
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Query Sequence  YTESQLR. . . . . . . AGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYL
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Template Sequence  SLAHAMRAHPHLLMEDLRILVIDLD. PQSSATMFLSHKHSIGIVNATSAQAMLQNVS. . REELLEEFIVPSVVPGV. . DV
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TTTGGG




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   128.130.........140.........150.. .......160.........170.........180... ......190.........200 ..
 
   1848.1850.........1860.........1870.........1880.........1890.........1900.........1910.........1920.....
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Query Sequence  LPAGYSLEEQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPS. .
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Template Sequence  MPASIDDA. . . . . . . . . . . . . . . . . . . . . . . . . . . FIASDWRELCNEHLPGQNIHAVLKENVIDKLKSDYDFILVDSGPH
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TT...........................TSTTS
TTSTTTT
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   203......210 .........220.........230.........240.........250.....
 
   1926...1930.........1940.........1950.......
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Query Sequence  . . . CPASVLKCAEALQLPVVSQEWVIQCLIVGERI
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Template Sequence  LDAFLKNALASANILFTPLPPATVDFHSSLKYVAR
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   256...260.........270.........280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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