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Job DescriptionQ12888
Confidence29.26%DateTue Apr 3 15:01:59 BST 2012
Rank228Aligned Residues106
% Identity12%Templatec1z3iX_
PDB info PDB header:recombination/dna bindingChain: X: PDB Molecule:similar to rad54-like; PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18291830.........1840.........1850.........1860. ........1870.........1880.........1890....
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Query Sequence  VWVHDSCHANQLQNYRNYLLPAGYSLEEQRILD. . . . . . . . . . . . . . WQPRENPFQNLKVLLVSDQQQNFLELWSEILMT
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Template Sequence  KFLWDCVTGRRIENSYGCIMADEMGL. . GKTLQCITLIWTLLKQSPDCKPEID. . . . . KVIVVSPSS. LVRNWYNEVGKW
Template Known Secondary structure  TTSSSTT




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   156...160.........170.........180. ........190.........200...... ...210..... ....220.......
 
   1895....1900........ .1910.........1920.........1930.........1940..
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Query Sequence  GGAASVKQHHSSAH. . . . . . . . . . . . NKDIALGVFDVVVTDPSCPASVLKCAEALQLPVV
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Template Sequence  LGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLV
Template Known Secondary structure  GGG


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   228.230.........240.........250.........260.........270.........280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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