Emaill.a.kelley@imperial.ac.uk
DescriptionQ12888
DateTue Apr 3 15:01:59 BST 2012
Unique Job IDa3d9f9a43ef49ab0

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1kzyD_



100.0 100 PDB header:dna binding protein, protein binding
Chain: D: PDB Molecule:tumor suppressor p53-binding protein 1;
PDBTitle: crystal structure of the 53bp1 brct region complexed to2 tumor suppressor p53
2d1kzyc2



100.0 100 Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
3c2vxcA_



100.0 24 PDB header:cell cycle
Chain: A: PDB Molecule:dna repair protein rhp9;
PDBTitle: structure of the crb2-brct2 domain complex with2 phosphopeptide.
4d1kzyc1



100.0 100 Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
5c1xniI_



99.9 100 PDB header:cell cycle
Chain: I: PDB Molecule:tumor suppressor p53-binding protein 1;
PDBTitle: tandem tudor domain of 53bp1
6c3l40A_



99.9 17 PDB header:cell cycle
Chain: A: PDB Molecule:brct-containing protein 1;
PDBTitle: crystal structure of s. pombe brc1 brct5-brct6 domains
7c2azmB_



99.9 20 PDB header:cell cycle
Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1;
PDBTitle: crystal structure of the mdc1 brct repeat in complex with2 the histone tail of gamma-h2ax
8c1ssfA_



99.9 100 PDB header:cell cycle
Chain: A: PDB Molecule:transformation related protein 53 binding
PDBTitle: solution structure of the mouse 53bp1 fragment (residues2 1463-1617)
9c3al3A_



99.9 19 PDB header:dna binding protein/protein binding
Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1;
PDBTitle: crystal structure of topbp1 brct7/8-bach1 peptide complex
10c3t1nA_



99.9 16 PDB header:cell cycle/peptide
Chain: A: PDB Molecule:microcephalin;
PDBTitle: structure of human microcephalin (mcph1) tandem brct domains in2 complex with a cdc27 phosphopeptide
11c2r1zB_



99.8 13 PDB header:antitumor protein
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 brct repeat
12c1z56C_



99.8 16 PDB header:ligase
Chain: C: PDB Molecule:dna ligase iv;
PDBTitle: co-crystal structure of lif1p-lig4p
13c1y98A_



99.8 17 PDB header:antitumor protein
Chain: A: PDB Molecule:breast cancer type 1 susceptibility protein;
PDBTitle: structure of the brct repeats of brca1 bound to a ctip2 phosphopeptide.
14c1l0bA_



99.8 19 PDB header:unknown function
Chain: A: PDB Molecule:brca1;
PDBTitle: crystal structure of rat brca1 tandem-brct region
15c2xnkA_



99.8 12 PDB header:isomerase
Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1;
PDBTitle: structure and function of the rad9-binding region of the dna damage2 checkpoint adaptor topbp1
16c3ii6Y_



99.8 18 PDB header:ligase/dna binding protein
Chain: Y: PDB Molecule:dna ligase 4;
PDBTitle: structure of human xrcc4 in complex with the tandem brct2 domains of dna ligaseiv.
17d2g3ra2



99.6 100 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
18c3t7kB_



99.6 13 PDB header:protein binding
Chain: B: PDB Molecule:regulator of ty1 transposition protein 107;
PDBTitle: complex structure of rtt107p and phosphorylated histone h2a
19d2g3ra1



99.6 100 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
20c2d8mA_



99.3 21 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-repair protein xrcc1;
PDBTitle: solution structure of the first brct domain of dna-repair2 protein xrcc1
21d1t15a2



not modelled 99.2 19 Fold:BRCT domain
Superfamily:BRCT domain
Family:BRCT domain
22d1wf6a_



not modelled 99.1 16 Fold:BRCT domain
Superfamily:BRCT domain
Family:DNA topoisomerase II binding protein 1, TopBP1
23c2qqsB_



not modelled 99.0 27 PDB header:oxidoreductase
Chain: B: PDB Molecule:jmjc domain-containing histone demethylation
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
24c2e2wA_



not modelled 99.0 19 PDB header:ligase
Chain: A: PDB Molecule:dna ligase 4;
PDBTitle: solution structure of the first brct domain of human dna2 ligase iv
25d1l0ba1



not modelled 99.0 28 Fold:BRCT domain
Superfamily:BRCT domain
Family:BRCT domain
26c2xdpA_



not modelled 98.9 26 PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 4c;
PDBTitle: crystal structure of the tudor domain of human jmjd2c
27d1t15a1



not modelled 98.9 24 Fold:BRCT domain
Superfamily:BRCT domain
Family:BRCT domain
28c3dlmA_



not modelled 98.9 21 PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setdb1;
PDBTitle: crystal structure of tudor domain of human histone-lysine n-2 methyltransferase setdb1
29c2couA_



not modelled 98.8 19 PDB header:cell cycle
Chain: A: PDB Molecule:ect2 protein;
PDBTitle: solution structure of the second brct domain of epithelial2 cell transforming 2
30c2ebwA_



not modelled 98.8 18 PDB header:transferase
Chain: A: PDB Molecule:dna repair protein rev1;
PDBTitle: solution structure of the brct domain from human dna repair2 protein rev1
31c3l3eA_



not modelled 98.8 18 PDB header:cell cycle
Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1;
PDBTitle: crystal structure of the sixth brct domain of human topbp1
32d1cdza_



not modelled 98.8 19 Fold:BRCT domain
Superfamily:BRCT domain
Family:DNA-repair protein XRCC1
33c3ktfB_



not modelled 98.8 15 PDB header:cell cycle
Chain: B: PDB Molecule:microcephalin;
PDBTitle: structure of the n-terminal brct domain of human2 microcephalin (mcph1).
34c2ep8A_



not modelled 98.7 29 PDB header:cell cycle
Chain: A: PDB Molecule:pescadillo homolog 1;
PDBTitle: solution structure of the brct domain from human pescadillo2 homolog 1
35c3ef1A_



not modelled 98.6 21 PDB header:hydrolase
Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain
PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
36c2cokA_



not modelled 98.6 16 PDB header:transferase
Chain: A: PDB Molecule:poly [adp-ribose] polymerase-1;
PDBTitle: solution structure of brct domain of poly(adp-ribose)2 polymerase-1
37c3ef0A_



not modelled 98.6 22 PDB header:hydrolase
Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain
PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
38c2fhdA_



98.6 20 PDB header:cell cycle
Chain: A: PDB Molecule:dna repair protein rhp9/crb2;
PDBTitle: crystal structure of crb2 tandem tudor domains
39c2jw5A_



not modelled 98.5 11 PDB header:protein binding
Chain: A: PDB Molecule:dna polymerase lambda;
PDBTitle: polymerase lambda brct domain
40c3qiiA_



not modelled 98.4 31 PDB header:transcription regulator
Chain: A: PDB Molecule:phd finger protein 20;
PDBTitle: crystal structure of tudor domain 2 of human phd finger protein 20
41c2equA_



not modelled 98.4 27 PDB header:protein binding
Chain: A: PDB Molecule:phd finger protein 20-like 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1
42d1l0ba2



not modelled 98.2 26 Fold:BRCT domain
Superfamily:BRCT domain
Family:BRCT domain
43c3p8dB_



not modelled 98.1 29 PDB header:protein binding
Chain: B: PDB Molecule:medulloblastoma antigen mu-mb-50.72;
PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form)
44c2ebuA_



not modelled 98.1 16 PDB header:replication
Chain: A: PDB Molecule:replication factor c subunit 1;
PDBTitle: solution structure of the brct domain from human2 replication factor c large subunit 1
45c2dunA_



not modelled 98.0 17 PDB header:transferase
Chain: A: PDB Molecule:dna polymerase mu;
PDBTitle: solution structure of brct domain of dna polymerase mu
46d1l7ba_



not modelled 97.7 16 Fold:BRCT domain
Superfamily:BRCT domain
Family:DNA ligase
47d1in1a_



not modelled 97.7 18 Fold:BRCT domain
Superfamily:BRCT domain
Family:DNA ligase
48c2coeA_



not modelled 97.4 17 PDB header:transferase
Chain: A: PDB Molecule:deoxynucleotidyltransferase, terminal variant;
PDBTitle: solution structure of brct domain of terminal2 deoxynucleotidyltransferase
49c2l42A_



not modelled 97.2 22 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rap1;
PDBTitle: the solution structure of rap1 brct domain from saccharomyces2 cerevisiae
50c2e5qA_



not modelled 97.1 31 PDB header:transcription
Chain: A: PDB Molecule:phd finger protein 19;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 19, isoform b [homo sapiens]
51c2e5pA_



not modelled 97.1 34 PDB header:transcription
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 1 (phf1 protein)
52c2eqjA_



not modelled 97.0 36 PDB header:transcription
Chain: A: PDB Molecule:metal-response element-binding transcription
PDBTitle: solution structure of the tudor domain of metal-response2 element-binding transcription factor 2
53c2xk0A_



not modelled 96.3 22 PDB header:transcription
Chain: A: PDB Molecule:polycomb protein pcl;
PDBTitle: solution structure of the tudor domain from drosophila2 polycomblike (pcl)
54c4a4fA_



not modelled 95.7 25 PDB header:rna binding protein
Chain: A: PDB Molecule:survival of motor neuron-related-splicing factor 30;
PDBTitle: solution structure of spf30 tudor domain in complex with2 symmetrically dimethylated arginine
55d1mhna_



not modelled 95.1 26 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
56c1g5vA_



not modelled 94.8 26 PDB header:translation
Chain: A: PDB Molecule:survival motor neuron protein 1;
PDBTitle: solution structure of the tudor domain of the human smn2 protein
57d2diga1



not modelled 94.7 27 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
58d1qo0d_



not modelled 94.6 16 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:Positive regulator of the amidase operon AmiR
59c3mmnA_



not modelled 94.0 22 PDB header:transferase
Chain: A: PDB Molecule:histidine kinase homolog;
PDBTitle: crystal structure of the receiver domain of the histidine kinase cki12 from arabidopsis thaliana complexed with mg2+
60c2d9tA_



not modelled 93.9 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tudor domain-containing protein 3;
PDBTitle: solution structure of the tudor domain of tudor domain2 containing protein 3 from mouse
61d2d9ta1



not modelled 93.5 21 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
62c3pnwX_



not modelled 93.2 21 PDB header:protein binding/immune system
Chain: X: PDB Molecule:tudor domain-containing protein 3;
PDBTitle: crystal structure of the tudor domain of human tdrd3 in complex with2 an anti-tdrd3 fab
63c3metB_



not modelled 93.0 22 PDB header:transcription
Chain: B: PDB Molecule:saga-associated factor 29 homolog;
PDBTitle: crystal structure of sgf29 in complex with h3k4me2
64c2rjnA_



not modelled 92.8 20 PDB header:hydrolase
Chain: A: PDB Molecule:response regulator receiver:metal-dependent
PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
65c4dadA_



not modelled 92.5 17 PDB header:signaling protein, signal transduction
Chain: A: PDB Molecule:putative pilus assembly-related protein;
PDBTitle: crystal structure of a putative pilus assembly-related protein2 (bpss2195) from burkholderia pseudomallei k96243 at 2.50 a resolution
66c3snkA_



not modelled 92.1 19 PDB header:signaling protein
Chain: A: PDB Molecule:response regulator chey-like protein;
PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution
67c1a2oB_



not modelled 91.7 22 PDB header:bacterial chemotaxis
Chain: B: PDB Molecule:cheb methylesterase;
PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain
68c2ayxA_



not modelled 90.8 17 PDB header:transferase
Chain: A: PDB Molecule:sensor kinase protein rcsc;
PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
69c3izbA_



not modelled 90.1 23 PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
70d2qqra1



not modelled 89.4 36 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
71c1ny5A_



not modelled 89.2 24 PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
72c3r0jA_



not modelled 88.8 26 PDB header:dna binding protein
Chain: A: PDB Molecule:possible two component system response transcriptional
PDBTitle: structure of phop from mycobacterium tuberculosis
73c2hqrA_



not modelled 88.7 15 PDB header:signaling protein
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
74c2zwmA_



not modelled 88.7 17 PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein yycf;
PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis
75d2diqa1



not modelled 88.3 29 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
76d2hqxa1



not modelled 88.2 17 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
77c2hqxB_



not modelled 88.2 17 PDB header:transcription
Chain: B: PDB Molecule:p100 co-activator tudor domain;
PDBTitle: crystal structure of human p100 tudor domain conserved2 region
78c3cz5B_



not modelled 87.6 15 PDB header:transcription regulator
Chain: B: PDB Molecule:two-component response regulator, luxr family;
PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
79d2qqra2



not modelled 87.2 27 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
80c3f6cB_



not modelled 86.8 13 PDB header:dna binding protein
Chain: B: PDB Molecule:positive transcription regulator evga;
PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
81c3eodA_



not modelled 86.5 22 PDB header:signaling protein
Chain: A: PDB Molecule:protein hnr;
PDBTitle: crystal structure of n-terminal domain of e. coli rssb
82d2qqsa2



not modelled 86.3 26 Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
83d1jbea_



not modelled 86.3 21 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
84c3hv2B_



not modelled 85.7 18 PDB header:signaling protein
Chain: B: PDB Molecule:response regulator/hd domain protein;
PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
85d1kgsa2



not modelled 85.5 19 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
86c3pdiB_



not modelled 85.3 18 PDB header:protein binding
Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn;
PDBTitle: precursor bound nifen
87d1qkka_



not modelled 84.8 16 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
88d2b4aa1



not modelled 84.7 23 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
89c3nhzA_



not modelled 84.2 20 PDB header:dna binding protein
Chain: A: PDB Molecule:two component system transcriptional regulator mtra;
PDBTitle: structure of n-terminal domain of mtra
90c3mp6A_



not modelled 84.0 24 PDB header:histone binding protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein, linker, saga-
PDBTitle: complex structure of sgf29 and dimethylated h3k4
91c1s1hB_



not modelled 83.9 23 PDB header:ribosome
Chain: B: PDB Molecule:40s ribosomal protein s0-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
92d1dcfa_



not modelled 83.6 21 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:Receiver domain of the ethylene receptor
93c2hqoA_



not modelled 81.9 15 PDB header:signaling protein
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
94d1vmda_



not modelled 81.7 21 Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
95c2rdmB_



not modelled 81.6 25 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:response regulator receiver protein;
PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419
96d1heya_



not modelled 81.5 19 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
97c3t8yA_



not modelled 81.4 20 PDB header:hydrolase
Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate
PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb
98c1w25B_



not modelled 81.3 23 PDB header:signaling protein
Chain: B: PDB Molecule:stalked-cell differentiation controlling protein;
PDBTitle: response regulator pled in complex with c-digmp
99d1xhfa1



not modelled 81.3 11 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
100c3hn7A_



not modelled 81.0 14 PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase;
PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution
101c3h1gA_



not modelled 80.6 22 PDB header:signaling protein
Chain: A: PDB Molecule:chemotaxis protein chey homolog;
PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori
102d1s8na_



not modelled 80.6 22 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
103c3n0rA_



not modelled 80.3 12 PDB header:signaling protein
Chain: A: PDB Molecule:response regulator;
PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
104c2ef0A_



not modelled 80.2 17 PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from thermus2 thermophilus
105c1zn2A_



not modelled 80.0 19 PDB header:transcription regulator
Chain: A: PDB Molecule:response regulatory protein;
PDBTitle: low resolution structure of response regulator styr
106d1ny5a1



not modelled 79.2 25 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
107d1wgsa_



not modelled 79.2 11 Fold:SH3-like barrel
Superfamily:Chromo domain-like
Family:Chromo barrel domain
108d2ayxa1



not modelled 79.1 18 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
109c3dzdA_



not modelled 79.1 21 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
110c2j48A_



not modelled 78.7 16 PDB header:transferase
Chain: A: PDB Molecule:two-component sensor kinase;
PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein.
111c2xznB_



not modelled 78.3 17 PDB header:ribosome
Chain: B: PDB Molecule:rps0e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
112c1kgsA_



not modelled 78.1 25 PDB header:dna binding protein
Chain: A: PDB Molecule:dna binding response regulator d;
PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima
113c3grcD_



not modelled 77.4 20 PDB header:transferase
Chain: D: PDB Molecule:sensor protein, kinase;
PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
114d1a2oa1



not modelled 76.3 20 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
115d1zgza1



not modelled 76.1 11 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
116c2wacA_



not modelled 76.0 22 PDB header:splicing
Chain: A: PDB Molecule:cg7008-pa;
PDBTitle: extended tudor domain of drosophila melanogaster tudor-sn (2 p100)
117c3c3wB_



not modelled 75.1 25 PDB header:transcription
Chain: B: PDB Molecule:two component transcriptional regulatory protein devr;
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr
118d1dbwa_



not modelled 73.9 19 Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
119c3a0rB_



not modelled 73.8 28 PDB header:transferase
Chain: B: PDB Molecule:response regulator;
PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360)
120c2eqkA_



not modelled 73.7 21 PDB header:transcription
Chain: A: PDB Molecule:tudor domain-containing protein 4;
PDBTitle: solution structure of the tudor domain of tudor domain-2 containing protein 4