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Job Description | Q12888 | Confidence | 98.09% | Date | Tue Apr 3 15:01:59 BST 2012 |
Rank | 44 | Aligned Residues | 95 |
% Identity | 16% | Template | c2ebuA_ |
PDB info |
PDB header:replication | Chain: A: PDB Molecule:replication factor c subunit 1; |
PDBTitle: solution structure of the brct domain from human2 replication factor c large subunit 1
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Resolution | UNK |
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1721 | . | . | . | |
. | . | . | . | . | 1730 | . | . | . | . | . | . | . | . | . | 1740 | . | . | . | . | . | . | . | . | . | 1750 | . | . | . | . | . | . | . | . | . | 1760 | . | . | . | . | . | . | . | . | . | 1770 | . | . | . | . | . | . | . | . | . | 1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | L | P | L | . |
N | K | T | L | F | L | G | Y | A | F | L | L | T | M | A | T | T | S | D | K | L | A | S | R | S | K | L | P | D | G | P | T | G | S | S | E | E | E | E | E | F | L | E | I | P | P | F | N | K | Q | Y | T | E | S | Q | L | R | A | G | A | G | Y | I | L | E | D | F | N | E | A | Q | C | N | T | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | I | P | K | G | A | E | N | C | L | E | G | L | I | F | V | I | T | . |
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V | L | E | S | I | E | R | D | E | A | K | S | L | I | E | R | Y | G | G | K | V | T | G | N | V | S | K | K | T | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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398 | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | |
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. | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | |
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1800 | . | . | . | . | . | . | . | . | . | 1810 | . | . | . | . | . | . | . | . | . | 1820 | . | . | . | . | . | . | . | . | . | 1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . | . | 1850 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | Q | C | L | L | I | A | D | Q | H | C | R | T | R | K | Y | F | L | C | L | A | S | G | I | P | C | V | S | H | V | W | V | H | D | S | C | H | A | N | Q | L | Q | N | Y | R | N | Y | L | L | P | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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N | Y | L | V | M | G | R | D | S | G | Q | S | K | S | D | K | A | A | A | L | G | T | K | I | I | D | E | D | G | L | L | N | L | I | R | T | M | P | G | K | K | . |
S | K | Y | E | I | A | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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446 | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | |
. | . | . | 490 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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