Return to main results Retrieve Phyre Job Id

Job DescriptionQ9H305
Confidence29.26%DateFri May 25 09:56:13 BST 2012
Rank17Aligned Residues26
% Identity12%Templatec2yhoE_
PDB info PDB header:ligaseChain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip; PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.......
Predicted Secondary structure 









Query SS confidence 

























Query Sequence  CLINDFKDVTHTCPSCKAYIYTYKRL
Query Conservation         
  
 
  
        
 
Alig confidence 

























Template Conservation    
  
      

 

  
     
Template Sequence  VCCESCAAQLQSCPVCRSRVEHVQHV
Template Known Secondary structure 
B
TT
SB
TTT

B


Template Predicted Secondary structure 










Template SS confidence 

























   406...410.........420.........430.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions