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Job DescriptionP51451
Confidence100.00%DateWed May 9 17:30:27 BST 2012
Rank59Aligned Residues239
% Identity27%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260 .........270.........280.........290.........300..... ....310......
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Query Sequence  QSLRLVRKLGSGQFGEVWMGYY. KNNMKVAIKTLKEGTMSPEAFLGEANVMKALQHERLVRLYAVVTK. EPIYIVTEYMA
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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...TTT



TT..TT


TTB


SS


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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   317..320.........330.........340.........350.........360........ .370.........380.........390...
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Query Sequence  RGCLLDFLKTDEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILV. . . SEALCCKIADFGLARIIDSEYTAQE
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Template Sequence  GGELFDEIIHRM. . KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BS..S

TT
S

SGGGS
SSTT




TT

BTTB
B

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   143......150.... .....160.........170.........180.........190.........200.........210.........220
 
   394.....400.........410.........420.........430.........440.........450.. .......460.........470
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Query Sequence  GAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNPEVIRNLERGY. . . RMPRPDTCPPELYRGVIA
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Template Sequence  RL. GTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA. KDLIK
Template Known Secondary structure 

.S
TTT

T.T
B
T.SS
SS

SST




SGGGTTS
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   221. .......230.... .....240.........250..... ....260.........270.........280.........290. .....
 
   471........480........
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Query Sequence  ECWRSRPEERPTFEFLQS
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Template Sequence  QMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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