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Job DescriptionP51451
Confidence100.00%DateWed May 9 17:30:27 BST 2012
Rank136Aligned Residues232
% Identity24%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260 .........270.........280.........290.........300..... ....310.........320......
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Query Sequence  SGQFGEVWMGYY. KNNMKVAIKTLKEGTMSPEAFLGEANVMKALQHERLVRLYAVVTK. EPIYIVTEYMARGCLLDFLKT
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Template Sequence  KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA
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   16...20.........30.........40.. .......50.........60.........70.........80.........90..
 
   327..330.........340.........350.........360......... 370.........380.........390.........400...
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Query Sequence  DEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILVS. . . EALCCKIADFGLARIIDSEYTAQEGAKFPIKWTA
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Template Sequence  RE. . FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG. YLS
Template Known Secondary structure  S..S

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   104. ....110.........120.........130.........140.........150.........160.........170....... ..180
 
   404.....410.........420.........430.........440.........450........ .460.........470.........480
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Query Sequence  PEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNPEVIRNLERGYRMPRPD. . . TCPPELYRGVIAECWRSRPEER
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Template Sequence  PEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA. KSLIDSMLTVNPKKR
Template Known Secondary structure  TT

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   181........190.........200....... ..210.........220.........230.........240... ......250........
 
   481.......
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Query Sequence  PTFEFLQS
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Template Sequence  ITADQALK
Template Known Secondary structure 

TT
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   259260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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