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Job DescriptionP51451
Confidence100.00%DateWed May 9 17:30:27 BST 2012
Rank156Aligned Residues237
% Identity27%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QSLRLVRKLGSGQFGEVWMGYY. KNNMKVAIKTLK. . EGTMSPEAFLGEANVMKALQHERLVRLYAVVTK. EPIYIVTEY
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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SS
TTT

B


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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   315....320.........330.........340.........350.........360........ .370.........380.........390.
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Query Sequence  MARGCLLDFLKTDEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILV. . . SEALCCKIADFGLARIIDSEYTA
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Template Sequence  YTGGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS. . . . . . . . .
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   155....160........ .170.........180.........190.........200.........210.........220...
 
   392.......400.........410.........420.........430.........440.........450. ........460........
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Query Sequence  QEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNPEVIRNLERG. . . YRMPRPDTCPPELYRGV
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Template Sequence  TCFQQNTTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA. KDL
Template Known Secondary structure  TTB




GGG

GGGGGT


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SGGGGGS
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   224.....230.........240.........250.........260.. .......270.........280.........290........ .300.
 
   469470.........480........
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Query Sequence  IAECWRSRPEERPTFEFLQS
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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