Job Description P51451 Confidence 99.66% Date Wed May 9 17:30:27 BST 2012 Rank 363 Aligned Residues 88 % Identity 20% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		M	E	R	W	F	F	R	S	Q	G	R	K	E	A	E	R	Q	L	L	A	P	I	N	K	A	G	S	F	L	I	R	E	S	E	T	N	K	G	A	F	S	L	S	V	K	D	V	T	T	Q	G	E	L	I	K	H	Y	K	I	R	C	.	.	L	D	E	G	G	Y	Y	I	S	P	R	I	T	F	P	S	L
Query Conservation																																																															.	.
Alig confidence								.															.	.																								.	.	.													.	.
Template Conservation								.															.	.																								.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	.	.	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	.	.	.	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure		T		T	T	B		.												T	T	S	.	.		T	T									S	T	T										.	.	.		T	T																				S	S	S				S	S
Template Predicted Secondary structure								.															.	.																								.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	V	Q	H	Y	S	K	K	G	D	G	L	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions