Job Description P51451 Confidence 100.00% Date Wed May 9 17:30:27 BST 2012 Rank 263 Aligned Residues 242 % Identity 23% Template c3gc0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp Resolution 2.00 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																										.																																												.
Query SS confidence																										.																																												.
Query Sequence		Q	S	L	R	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	N	.	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	A	L	Q	H	E	R	L	V	R	L	Y	A	V	V	T	K	.	E	P	I	Y	I	V	T	E	Y	M	A
Query Conservation																										.																																												.
Alig confidence																										.													.	.	.	.																												.
Template Conservation																																							.	.	.	.
Template Sequence		D	R	Y	R	R	I	T	K	L	G	E	G	T	Y	G	E	V	Y	K	A	I	D	T	V	T	N	E	T	V	A	I	K	R	I	R	L	E	.	.	.	.	H	T	A	I	R	E	V	S	L	L	K	E	L	Q	H	R	N	I	I	E	L	K	S	V	I	H	H	N	H	R	L	H	L	I	F	E	Y	A	E
Template Known Secondary structure		G	G											S	S	S								T	T	T	T												.	.	.	.										G	G	G			B	T	T	B										T	T										S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	G	C	L	L	D	F	L	K	T	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	I	A	E	G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	.	L	V	S	E	A	L	C	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A
Query Conservation																																																				.
Alig confidence														.	.	.																																				.																	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Sequence		N	D	L	K	K	Y	M	D	K	N	P	D	.	.	.	V	S	M	R	V	I	K	S	F	L	Y	Q	L	I	N	G	V	N	F	C	H	S	R	R	C	L	H	R	D	L	K	P	Q	N	L	L	L	S	V	E	T	P	V	L	K	I	G	D	F	G	L	A	.	.	.	.	.	.	.	.	.	R	A	F	E
Template Known Secondary structure												T	T	.	.	.																							T	T				S				G	G	G															T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	.	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	V	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	N	L	E	R	G	Y	R	M	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		I	I	T	L	W	Y	R	P	P	E	I	L	L	G	S	R	H	Y	S	T	S	V	D	I	W	S	I	A	C	I	W	A	E	M	L	M	.	K	T	P	L	F	P	G	D	S	E	I	D	Q	L	F	K	I	F	E	V	L	G	L	P	D	D	T	T	W	P	G	V	T	A	L	P	D	W	K	Q	S	F	P
Template Known Secondary structure		G	G	G	G	G	G							T	T		S				T																	.	S	S		S	S			S	S																	T	T	T	S	T	T	G	G	G	S	T	T			T	T	S
Template Predicted Secondary structure																																						.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
													457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	P	D	T	C	P	P	E	L	Y	R	G	V	I	A	E	C	W	R	S	R	P	E	E	R	P	T	F	E	F	L	Q	S	V	L	E	D	F	Y	T	A	T	E	R	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.									.																									.	.
Template Conservation																					.																									.	.
Template Sequence		K	F	R	G	K	T	L	K	R	V	L	G	A	L	L	D	D	E	G	.	L	D	L	L	T	A	M	L	E	M	D	P	V	K	R	I	S	A	K	N	A	L	E	H	.	.	P	Y	F	S	H	N	D	F	D
Template Known Secondary structure													G	G	G	S					.								T		S	S	G	G	G	S									S	.	.	G	G	G	S	S			S
Template Predicted Secondary structure																					.																									.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions