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Job DescriptionP51451
Confidence100.00%DateWed May 9 17:30:27 BST 2012
Rank203Aligned Residues240
% Identity23%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270........ .280.........290.. .......300.....
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Query Sequence  QDEWEIPRQSLRLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSP. . . EAFLGEANVMKALQ. . HERLVRLYAVVTK
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Template Sequence  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT
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TT

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   515....520.........530.........540.........550.........560.........570.........580.........590....
 
   306. ..310.........320.........330.........340.........350.........360.........370.........380....
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Query Sequence  EP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILVSEALCCKIADFGLARI
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Template Sequence  DQYIYMVMECGNIDLNSWLKKKKS. . . IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. .
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   595....600.........610........ .620.........630.........640.........650....... ..660........
 
   385....390.........400.........410. ........420.........430........ .440.........450. ........460.
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Query Sequence  IDSEYTAQEGAKFPIKWTAPEAIHFGV. FTIKADVWSFGVLLMEVVTYGRVPYPG. MSNPEVIRNLERG. YRMPRPDTCP
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Template Sequence  . . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPE
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   669670.........680.........690.........700..... ....710.........720.........730.......
 
   462.......470.........480........
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Query Sequence  PELYRGVIAECWRSRPEERPTFEFLQS
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Template Sequence  KDL. QDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  .T
SSTTTS

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   762.. .....770.........780.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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