Job Description P51451 Confidence 100.00% Date Wed May 9 17:30:27 BST 2012 Rank 245 Aligned Residues 224 % Identity 21% Template c3alnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp Resolution 2.30 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																				.																					.	.	.
Query SS confidence																																				.																					.	.	.
Query Sequence		N	P	W	A	Q	D	E	W	E	I	P	R	Q	S	L	R	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	.	K	N	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	.	.	.	F	L	G	E	A	N	V	M	K	A	L	Q	H	E	R	L	V	R	L	Y	A	V
Query Conservation																																				.																					.	.	.
Alig confidence																																				.																					.	.	.
Template Conservation
Template Sequence		K	I	S	P	E	Q	H	W	D	F	T	A	E	D	L	K	D	L	G	E	I	G	R	G	A	Y	G	S	V	N	K	M	V	H	K	P	S	G	Q	I	M	A	V	K	R	I	R	S	T	V	D	E	K	E	Q	K	Q	L	L	M	D	L	D	V	V	M	R	S	S	D	C	P	Y	I	V	Q	F	Y	G	A
Template Known Secondary structure													T	T	S				.							S	S									T	T	T															S															T		T	T		T	T	B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		303	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																						.	.																													.
Query SS confidence					.																						.	.																													.
Query Sequence		V	T	K	.	E	P	I	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	.	.	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	I	A	E	G	M	A	Y	I	E	R	M	.	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	A	L	C	C	K	I	A	D
Query Conservation					.																						.	.																													.
Alig confidence					.																						.	.																													.
Template Conservation
Template Sequence		L	F	R	E	G	D	C	W	I	C	M	E	L	M	S	T	S	F	D	K	F	Y	K	Y	V	Y	S	V	L	D	D	V	I	P	E	E	I	L	G	K	I	T	L	A	T	V	K	A	L	N	H	L	K	E	N	L	K	I	I	H	R	D	I	K	P	S	N	I	L	L	D	R	S	G	N	I	K	L	C	D
Template Known Secondary structure					T	T										S	B												T	S																									T	T	S								S	G	G	G	B		B		T	T	S				B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	V	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	N	L	E	R	G	Y	R	M	P	R	P	D
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	L	Y	D	V	R	S	D	V	W	S	L	G	I	T	L	Y	E	L	A	T	.	G	R	F	P	Y	P	D	P	P	.	.	.	.	.	.	.	.	.	.	Q	L	S	N	S	E	E	R
Template Known Secondary structure			S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T				T	T																.	S									.	.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.																											.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	P	P	E	L	Y	R	G	V	I	A	E	C	W	R	S	R	P	E	E	R	P	T	F	E	F	L	Q	S
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		E	F	S	P	S	F	.	I	N	F	V	N	L	C	L	T	K	D	E	S	K	R	P	K	Y	K	E	L	L	K
Template Known Secondary structure								.										S	S	T	T	T	S							T	T
Template Predicted Secondary structure								.
Template SS confidence
		335	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions