252 c2vagA_ Probab=100.00  E-value=8.9e-38  Score=222.60  Aligned_columns=252  Identities=24%

Q ss_pred             CCCHHHEEEECCCCCCCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEECC
Q ss_conf             0027876772105878881799999779--9489999988630288999999999985499847------1387756369
Q batch____       235 EIPRQSLRLVRKLGSGQFGEVWMGYYKN--NMKVAIKTLKEGTMSPEAFLGEANVMKALQHERL------VRLYAVVTKE  306 (505)
Q Consensus       235 ~i~~~~~~~~~~LG~G~fg~V~~~~~~~--~~~VAvK~l~~~~~~~~~~~~E~~~l~~l~h~ni------v~~~g~~~~~  306 (505)
                      ++-.+++++.++||+|+||.||+|++..  ++.||||+++.+....+.+.+|+.+|+.|+|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCCCCCEECC
Q ss_conf             76999988898769999995689878999999999999999886313736820014777013754343222243000104
Q batch____       307 PIYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILVSEALCCKIADFGLARIID  386 (505)
Q Consensus       307 ~~~iv~E~~~~gsL~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~ih~dlk~~nil~~~~~~~kl~DfGls~~~~  386 (505)
                      ..+..+.....++....................+..+++.++.++|..+++|+|+++.|++++..+..++.||+.+....
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~  168 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLI  168 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEES
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf             00001221123675211122211101365655555445555543110122223455415898578862000345433444


Q ss_pred             CCCEEECCC-----------CCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-----
Q ss_conf             675010123-----------3372218977985389974689999999999999488999988898999999981-----
Q batch____       387 SEYTAQEGA-----------KFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNPEVIRNLER-----  450 (505)
Q Consensus       387 ~~~~~~~~~-----------~~~~~~~aPE~~~~~~~~~ksDvws~Gv~l~El~t~G~~P~~~~~~~~~~~~i~~-----  450 (505)
                      .........           .....+.+||......++.++|+|++|+++|++.+ ++.|+...+..+.+..+..     
T Consensus       169 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  247 (330)
T c2vagA_         169 NPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPL  247 (330)
T ss_dssp             CCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             4321000146633267542001210232100000111123542102258731004-889887589689999998513889


Q ss_pred             --------------------------------------CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             --------------------------------------89988876889899999999873789678699999999
Q batch____       451 --------------------------------------GYRMPRPDTCPPELYRGVIAECWRSRPEERPTFEFLQS  488 (505)
Q Consensus       451 --------------------------------------g~~~~~p~~~~~~~~~~l~~~c~~~~P~~RPt~~~i~~  488 (505)
                                                            ......+..+++.+ .+|+.+||+.||++|||++||++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         248 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL-FDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH-HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHH-HHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             9889744201212354656653210001110012333100235654589999-99999866588111776789967


