Job Description P51451 Confidence 99.76% Date Wed May 9 17:30:27 BST 2012 Rank 346 Aligned Residues 114 % Identity 21% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	S	N	F	V	A	R	V	E	S	L	E	M	E	R	W	F	F	R	S	Q	G	R	K	E	A	E	R	Q	L	L	A	P	I	N	K	A	G	S	F	L	I	R	E	S	E	T	N	K	G	A	F	S	L	S	V	K	D	V	T	T	Q	G	E	L	I	K	H	Y	K	I	R	C	L	D	E	G	G
Query Conservation
Alig confidence																																					.	.																							.	.	.	.													.
Template Conservation																																					.	.																							.	.	.	.													.
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	.	.	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	.	.	.	.	R	Y	S	R	S	L	H	A	R	I	E	Q	.	W	N	H	N
Template Known Secondary structure		S							T	T								T	T															T	T		.	.		T	T								S	S	T	T		S							.	.	.	.		T	T										.		T	T
Template Predicted Secondary structure																																					.	.																							.	.	.	.													.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.					.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.
		187	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																							.	.
Query SS confidence									.	.	.	.																							.	.
Query Sequence		Y	Y	I	S	P	R	I	.	.	.	.	T	F	P	S	L	Q	A	L	V	Q	H	Y	S	K	K	G	D	G	L	C	Q	R	.	.	L	T	L	P	C	V	R	P	A	P	Q	N
Query Conservation									.	.	.	.																							.	.
Alig confidence									.	.	.	.																							.	.
Template Conservation
Template Sequence		F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S
Template Known Secondary structure				S		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions