Job Description P51451 Confidence 100.00% Date Wed May 9 17:30:27 BST 2012 Rank 192 Aligned Residues 249 % Identity 39% Template c1y6aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: crystal structure of vegfr2 in complex with a 2-anilino-5-aryl-oxazole2 inhibitor Resolution 2.10 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																				.	.																																	.
Query SS confidence																																				.	.																																	.
Query Sequence		P	W	A	Q	D	E	W	E	I	P	R	Q	S	L	R	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	.	.	N	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	A	L	Q	H	.	E	R	L	V	R	L	Y	A	V	V	T
Query Conservation																																				.	.																																	.
Alig confidence																																				.	.														.	.																		.
Template Conservation																																																			.	.
Template Sequence		P	Y	D	A	S	K	W	E	F	P	R	D	R	L	K	L	G	K	P	L	G	R	Q	V	I	E	A	D	A	F	G	I	D	K	T	A	T	C	R	T	V	A	V	K	M	L	T	H	S	.	.	E	H	R	A	L	M	S	E	L	K	I	L	I	H	I	G	H	H	L	N	V	V	N	L	L	G	A	C	T
Template Known Secondary structure									B			G	G	G																		S	T	T	S	S	S														.	.																			T	T	B
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.			.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
		305			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																						.	.	.	.	.
Query SS confidence			.	.																						.	.	.	.	.
Query Sequence		K	.	.	E	P	I	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	.	.	.	.	.	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	I	A	E	G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	A	L	C	C	K	I	A
Query Conservation			.	.																						.	.	.	.	.
Alig confidence			.	.																						.	.	.	.	.
Template Conservation
Template Sequence		K	P	G	G	P	L	M	V	I	V	E	F	C	K	F	G	N	L	S	T	Y	L	R	S	K	R	N	E	F	V	P	Y	D	F	L	T	L	E	H	L	I	C	Y	S	F	Q	V	A	K	G	M	E	F	L	A	S	R	K	C	I	H	R	D	L	A	A	R	N	I	L	L	S	E	K	N	V	V	K	I	C
Template Known Secondary structure		S	S	S	S										T	T		B								T	T	T	S	B						B																						T	T				S				G	G	G					G	G	G
Template Predicted Secondary structure
Template SS confidence
		905	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	V	V	T	Y	G	R	V	P	Y	P	G	M	.	S	N	P	E	V	I	R	N	L	E	R	G	Y	R	M	P	R
Query Conservation																																																																.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	P	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	M	A	P	E	T	I	F	D	R	V	Y	T	I	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	F	S	L	G	A	S	P	Y	P	G	V	K	I	D	E	E	F	C	R	R	L	K	E	G	T	R	M	R	A
Template Known Secondary structure					G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G																													T	T	S			S	S	T	T				S										T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1044	.	.	.	.																			.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	T	C	P	P	E	L	Y	R	G	V	I	A	E	C	W	R	S	R	P	E	E	R	P	T	F	E	F	L	Q	S	V	L	E	D	F	Y	T	A	T
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		P	D	Y	T	T	P	E	M	.	Y	Q	T	M	L	D	C	W	H	G	E	P	S	Q	R	P	T	F	S	E	L	V	E	H	L	G	N	L	L	Q	A	N
Template Known Secondary structure			T	T						.								T		S	S	G	G	G	S
Template Predicted Secondary structure										.
Template SS confidence
		1126	.	.	.	1130	.	.	.		.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions