Job Description A0MZ66 Confidence 15.82% Date Sat Jun 16 10:26:01 BST 2012 Rank 45 Aligned Residues 81 % Identity 17% Template c2zvnF_ PDB info PDB header:signaling protein/transcription Chain: F: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group Resolution 3.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		Y	E	D	L	R	A	E	N	Q	K	T	K	E	K	C	D	K	I	R	Q	E	R	D	E	A	V	K	K	L	E	E	F	Q	.	.	.	K	I	S	H	M	V	I	E	E	V	N	F	M	Q	N	H	L	E	I	E	K	T	C	R	E	S	A	E	A	L	A	T	K	L	N	K	E	N	K	T	L	K	R	I
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		L	E	D	L	R	Q	Q	L	Q	Q	A	E	E	A	L	V	A	K	Q	E	L	I	D	K	L	K	E	E	A	E	Q	H	K	I	V	M	E	T	V	P	V	L	K	A	Q	A	D	I	Y	K	A	D	F	Q	A	E	R	H	A	R	E	K	L	V	E	K	K	E	Y	L	Q	E	Q	L	E	Q	L	Q	R	E
Template Known Secondary structure																																						T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		101	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions