Job Description A0MZ66 Confidence 6.12% Date Sat Jun 16 10:26:01 BST 2012 Rank 77 Aligned Residues 86 % Identity 19% Template c2eqbC_ PDB info PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex Resolution 2.70 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	D	E	A	V	K	K	L	E	E	F	Q	K	I	S	H	M	V	I	E	E	V	N	F	M	Q	N	H	L	E	I	E	K	T	C	R	E	S	A	E	A	L	A	T	K	L	N	K	E	N	K	T	L	K	R	I	S	M	L	Y	M	A	K	L	G	P	D	V	I	T	E	E	I	N	I	D	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A	E	E	E	A	D	K	L	N	K	E	V	E	D	L	T	A	S	L	F	D	E	A	N	N	M	V	A	D	A	R	K	E	K	Y	A	I	E	I	L	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		124	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	T	D	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	L	T	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions