Job Description Q9UKW4 Confidence 99.49% Date Thu Apr 26 09:47:10 BST 2012 Rank 239 Aligned Residues 54 % Identity 30% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

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		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.			.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		I	A	I	A	R	Y	D	F	C	A	R	D	M	R	E	L	S	L	L	K	G	D	V	V	K	I	Y	T	K	M	S	A	N	G	W	W	R	G	E	V	.	.	N	G	R	V	G	W	F	P	S	T	Y	V	E	E	D	E
Query Conservation																																										.	.
Alig confidence																																		.	.							.	.
Template Conservation																																		.	.
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	E	.	.	W	W	K	A	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R	V	D
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									S	S	S	.	.							T	T	T								G	G	G
Template Predicted Secondary structure																																		.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions