Job Description Q9UKW4 Confidence 97.34% Date Thu Apr 26 09:47:10 BST 2012 Rank 407 Aligned Residues 76 % Identity 21% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.		.	.	.	720	.	.	.	.	.								.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure																																																	.										.	.	.	.	.	.	.
Query SS confidence																																																	.										.	.	.	.	.	.	.
Query Sequence		Q	P	W	Y	A	G	A	M	E	R	L	Q	A	E	T	E	L	I	N	R	V	N	S	T	Y	L	V	R	H	R	T	K	E	S	G	E	Y	A	I	S	I	K	Y	N	N	E	A	.	K	H	I	K	I	L	T	R	D	.	.	.	.	.	.	.	G	F	F	H	I	A	E	N	R	K	F	K	S	L	M	E
Query Conservation																																																	.										.	.	.	.	.	.	.
Alig confidence							.																																										.										.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q
Template Known Secondary structure			T	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure							.
Template SS confidence
		6	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		742	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	V	E	Y
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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