Job Description Q9UKW4 Confidence 97.25% Date Thu Apr 26 09:47:10 BST 2012 Rank 418 Aligned Residues 95 % Identity 16% Template c3f7pA_ PDB info PDB header:structural protein/cell adhesion Chain: A: PDB Molecule:plectin-1; PDBTitle: crystal structure of a complex between integrin beta4 and2 plectin Resolution 2.75 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	L	I	H	C	K	V	L	P	T	N	H	R	V	T	W	D	S	A	Q	V	F	D	L	A	Q	T	L	R	D	G	V	L	L	C	Q	L	L	N	N	L	R	A	H	S	I	N	L	K	E	I	N	L	R	P	Q	M	S	Q	F	L	C	L	K	N	I	R	T	F	L	T	A	C	C	E	T	F	G	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Sequence		L	W	S	Q	R	.	.	.	.	.	.	.	M	V	E	G	Y	Q	G	L	R	C	D	N	F	T	S	S	W	R	D	G	R	L	F	N	A	I	I	H	R	H	K	P	L	L	I	D	M	N	K	V	Y	R	Q	T	N	.	.	.	.	.	.	L	E	N	L	D	Q	A	F	S	V	A	E	R	D	L	G	V
Template Known Secondary structure							.	.	.	.	.	.	.		T	T	T	S	T	T						S	S	G	G	G	T	T	S												G	G	G							T	T	S			.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.								.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	K	S	E	L	F	E	A	F	D	L	F	D	V	R	.	D	F	G	K	V	I	E	T	L	S	R	L	S	R	T
Query Conservation																	.
Alig confidence				.	.												.
Template Conservation				.	.
Template Sequence		T	R	.	.	L	L	D	P	E	D	V	D	V	P	Q	P	D	E	K	S	I	I	T	Y	V	S	S	L	Y	D	A
Template Known Secondary structure				.	.								S	S	S	S																T
Template Predicted Secondary structure				.	.
Template SS confidence
		260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions