Job Description Q9UKW4 Confidence 78.63% Date Thu Apr 26 09:47:10 BST 2012 Rank 499 Aligned Residues 70 % Identity 14% Template c2zetD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin Resolution 3.00 Å

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		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.													.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I	R	P	D	Y	A	D	S	N	F	.	.	.	.	.	.	.	.	.	.	.	.	H	D	F	K	M	H	T	F	T	R	V	T	S	C	K	V	C	Q	M	L	L	R	G	T	F	Y	Q	G	Y	L	C	F	K	C	G	A	R	A	H	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	E	E	A	E	H	V	W	A	V	V	Q	R	D	F	D	L	R	R	R	E	E	E	R	L	Q	G	L	K	G	K	I	Q	K	E	S	S	K	R	E	L	L	S	D	T	A	H	L	N	E	T	H	C	A	R	C	L	Q	P	Y	R	L	L	L	N	S	R	R	Q	C	L	E	C	S	L	F	V	C	K
Template Known Secondary structure																																												G	G	G	S	T	T					B		S	S	S			B	G	G	G		S	S						T	T	T						G
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		554	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	C
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		91	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions