Job Description Q9UKW4 Confidence 96.69% Date Thu Apr 26 09:47:10 BST 2012 Rank 453 Aligned Residues 74 % Identity 16% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	W	Y	A	G	A	M	E	R	L	Q	A	E	T	E	L	I	N	R	V	N	S	T	Y	L	V	R	H	R	T	K	E	S	G	E	Y	A	I	S	I	K	Y	N	N	E	A	K	H	I	K	I	L	T	R	D	G	F	F	H	I	A	E	N	R	K	F	K	S	L	M	E	L	V	E	Y	Y
Query Conservation
Alig confidence							.														.											.
Template Conservation							.														.											.
Template Sequence		H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y
Template Known Secondary structure		S	T	T			.														.	S	S									.	S	S	T	T										T	T											S	S					T	T				S	S								T
Template Predicted Secondary structure							.														.											.
Template SS confidence
		792	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.		810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions