Job Description Q9UKW4 Confidence 100.00% Date Thu Apr 26 09:47:10 BST 2012 Rank 13 Aligned Residues 297 % Identity 21% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		A	H	Q	P	K	C	P	E	N	D	I	R	S	C	C	L	A	E	I	K	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I	P	E	L	V	K	L	H	R	N	L	M	Q	E	I	H	D	S	I	V
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.																																.
Template Conservation																																																																																.
Template Sequence		E	E	E	Q	K	K	K	A	L	E	R	S	M	Y	V	L	S	E	L	V	E	T	E	K	M	Y	V	D	D	L	G	Q	I	V	E	G	Y	M	A	T	M	A	A	Q	G	V	P	E	S	L	R	G	R	D	R	I	V	F	G	N	I	Q	Q	I	Y	E	W	H	R	D	Y	F	L	Q	E	L	Q	R	.	C
Template Known Secondary structure							S																													T	T												S	S	S	G	G	G						T	T											T								.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	N	D	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	S	S	L	D	Y	I	S	K	T	K	E	D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		L	K	D	P	D	W	L	A	Q	L	F	I	K	H	E	R	R	L	H	M	Y	V	V	Y	C	Q	N	K	P	K	S	E	H	V	V	S	E	F	G	D	.	.	.	.	.	.	.	S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L	L
Template Known Secondary structure			S		G	G	G								T	T	T	T	T									T	S								T	T	T	S		.	.	.	.	.	.	.													S	S						T	T							T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		338	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	Q	E	L	V	K	H	T	T	.	D	P	T	E	K	A	N	L	K	L	A	L	D	A	M	K	D	L	A	Q	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D	K	H	T
Query Conservation											.
Alig confidence											.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	D	F	L	K	Y	Y	N	R	A	G	M	D	T	A	D	L	E	Q	A	V	E	V	M	C	F	V	P	K	R	C	N	D	M	M	T	L	G	R	L	R	.	.	.	.	.	.	.	.	.	.	.	G	F	E	G	K	L	T	A	Q	G	K	L	L	G	Q	D	T	F	W	V	T	E	P	S	R	G	R
Template Known Secondary structure									T	S	S	S		S																									G	G	G		B	.	.	.	.	.	.	.	.	.	.	.	S			S		S	T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.												.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D	K	E	N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	.	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E
Query Conservation																																																															.
Alig confidence		.	.																																					.	.	.	.																				.
Template Conservation		.	.																																					.	.	.	.
Template Sequence		.	.	E	R	R	V	F	L	F	E	Q	I	I	I	F	S	E	A	L	G	P	G	Y	V	Y	K	N	S	I	K	V	S	C	L	G	L	E	G	.	.	.	.	N	L	Q	G	D	P	C	R	F	A	L	T	S	R	G	P	E	G	G	I	Q	R	Y	V	L	Q	A	A	D	P	A	I	S	Q	A	W	I	K
Template Known Secondary structure		.	.								S	S																				G	G	G						.	.	.	.	S	G	G	G		T	T									S	S	S										S	S
Template Predicted Secondary structure		.	.																																					.	.	.	.
Template SS confidence
				378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		496	.	.	.	500	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	E	M	A	L	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	A	Q	I	L	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions