Job Description Q9UKW4 Confidence 97.43% Date Thu Apr 26 09:47:10 BST 2012 Rank 396 Aligned Residues 101 % Identity 14% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		403	.	.	.	.	.	.	410	.	.	.	.	.	.								.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																																											.	.	.
Query SS confidence																.	.	.	.	.	.	.																																											.	.	.
Query Sequence		G	D	G	E	I	R	I	T	T	L	D	K	H	T	.	.	.	.	.	.	.	K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	.	.	.	D	K	E	N	K	K	W	S	Y	G	F	Y	L	I
Query Conservation																.	.	.	.	.	.	.																																											.	.	.
Alig confidence																.	.	.	.	.	.	.																																											.	.	.
Template Conservation
Template Sequence		X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	A	L	S	S	W	T	R	Y	W	V	V	L	S	G	A	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K	V	S	I	V	G	W	X	V	Q	L	P	D	D	P	E	H	P	D	I	F	Q	L	N
Template Known Secondary structure													B	T	T	B			S													T	T							B	S	S	S	S			S	G	G	G	B		S	S		S						T	T									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	D	K	G	N	V	Y	K	F	Q	T	G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K	S
Template Known Secondary structure			T	T	S		S							S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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