Job Description Q9UKW4 Confidence 97.87% Date Thu Apr 26 09:47:10 BST 2012 Rank 362 Aligned Residues 113 % Identity 12% Template c2d87A_ PDB info PDB header:structural protein, protein binding Chain: A: PDB Molecule:smoothelin splice isoform l2; PDBTitle: solution structure of the ch domain from human smoothelin2 splice isoform l2 Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	L	I	H	C	K	V	L	P	T	N	H	R	V	T	W	D	S	A	Q	V	F	D	L	A	Q	T	L	R	D	G	V	L	L	C	Q	L	L	N	N	L	R	A	H	S	I	N	L	K	E	I	N	L	R	P	Q	M	S	Q	F	L	C	L	K	N	I	R	T	F	L	T	A	C	C	E	T	F	G	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Sequence		D	W	C	R	A	.	.	.	.	.	.	.	K	T	R	G	Y	E	H	V	D	I	Q	N	F	S	S	S	W	S	D	G	M	A	F	C	A	L	V	H	N	F	F	P	E	A	F	D	Y	G	Q	L	S	P	Q	N	.	.	.	.	.	.	R	R	Q	N	F	E	V	A	F	S	S	A	E	T	H	A	D	C
Template Known Secondary structure							.	.	.	.	.	.	.		S	S	S		T	T				S		T	T	T	T	T	T	S	S												T	T	T	S		S	T	T	S		S	S		.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.								.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		R	K	S	E	L	F	E	A	F	D	L	F	D	V	R	.	.	D	F	G	K	V	I	E	T	L	S	R	L	S	R	T	P	I	A	L	A	T	G	I	R	P	F	P	T	E	E	S	I	N
Query Conservation																	.	.
Alig confidence			.	.													.	.
Template Conservation			.	.
Template Sequence		P	.	.	Q	L	L	D	T	E	D	M	V	R	L	R	E	P	D	W	K	C	V	Y	T	Y	I	Q	E	F	Y	R	C	L	V	Q	K	G	L	V	K	T	K	K	S	S	G	P	S	S	G
Template Known Secondary structure			.	.			S								S	S	S																					T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		81			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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