 |
| Job Description | A0PJY2 | | Confidence | 96.95% | Date | Fri May 25 09:29:34 BST 2012 |
| Rank | 140 | Aligned Residues | 28 |
| % Identity | 32% | Template | c3iufA_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:zinc finger protein ubi-d4; |
PDBTitle: crystal structure of the c2h2-type zinc finger domain of human ubi-d4
|
| Resolution | 1.80 Å |
|
|   |   |
396 | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | K | K | P | F | T | C | P | T | C | G | K | G | F | C | R | N | F | D | L | K | K | H | V | R | K | L | H |
| Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|
|   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |
|
| Template Sequence |   |
R | D | K | P | Y | A | C | D | I | C | G | K | R | Y | K | N | R | P | G | L | S | Y | H | Y | A | H | S | H |
| Template Known Secondary structure |   |
T | T | S |
|  |  |
| T | T | T |
|
|  |  | S | S |  |  |  |  |  |  |  |  |  |  | S | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|