Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJY2
Confidence29.52%DateFri May 25 09:29:34 BST 2012
Rank306Aligned Residues28
% Identity21%Templatec2zetD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390.........400.........410..
Predicted Secondary structure 






















Query SS confidence 






































Query Sequence  CNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRN
Query Conservation 
  
   
     
  
   
    
  
  
   
   
Alig confidence 











...........















Template Conservation 
  
   
    ...........     
  
   

  
Template Sequence  CARCLQPYRLLL. . . . . . . . . . . NSRRQCLECSLFVCKS
Template Known Secondary structure 
SSS

BGGG
S...........S


TTT


GG
Template Predicted Secondary structure 









...........













Template SS confidence 






































   64.....70..... ....80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions