Job Description A0PJY2 Confidence 78.43% Date Fri May 25 09:29:34 BST 2012 Rank 220 Aligned Residues 51 % Identity 31% Template c2xzlA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex Resolution 2.40 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.	.	.	390	.	.			.	.	.											.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.												.	.				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.												.	.				.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	C	E	F	C	G	K	G	F	H	Q	K	G	N	Y	K	N	H	K	L	T	H	S	G	E	K	Q	F	K	C	N	I	C	N	K	A	F	.	.	.	.	.	.	H	Q	V	Y	N	L	T	F	H	M	H	.	.	T	H	N	.	.	.	.	.	.	.	.	.	.	D	K	K	P	F	T	C	P	T	C
Query Conservation																																								.	.	.	.	.	.												.	.				.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.												.	.				.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	C	A	Y	C	G	I	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	C	V	I	K	C	N	S	C	K	K	W	F	C	N	T	K	N	G	T	S	S	S	H	I	V	N	H	L	V	L	S	H	H	N	V	V	S	L	H	P	D	S	D	L	G	D	T	V	L	E	C	Y	N	C
Template Known Secondary structure					T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					T	T	T									S	S	S	S	S											T								T	T	S	S	S		S		B				S	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		406	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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