Job Description A0PJY2 Confidence 56.02% Date Fri May 25 09:29:34 BST 2012 Rank 264 Aligned Residues 51 % Identity 22% Template c2wjyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form Resolution 2.50 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.	.	.	390	.	.	.	.	.													.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	C	E	F	C	G	K	G	F	H	Q	K	G	N	Y	K	N	H	K	L	T	H	S	G	E	K	Q	F	K	C	N	I	C	N	K	A	F	.	.	.	.	.	.	H	Q	V	Y	N	L	T	F	H	M	H	T	H	N	.	.	.	.	.	.	.	.	.	.	.	.	D	K	K	P	F	T	C	P	T	C
Query Conservation																																								.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	C	S	Y	C	G	I	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	C	V	V	Y	C	N	T	S	K	K	W	F	C	N	G	R	G	N	T	S	G	S	H	I	V	N	H	L	V	R	A	K	C	K	E	V	T	L	H	K	D	G	P	L	G	E	T	V	L	E	C	Y	N	C
Template Known Secondary structure		T	S		T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T	T	T					S			T	T	S	S	S											T								T	T	S	T	T		S		B				T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130															.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		406	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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