Job Description A0PJY2 Confidence 99.89% Date Fri May 25 09:29:34 BST 2012 Rank 2 Aligned Residues 120 % Identity 22% Template c2wbtA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:b-129; PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna Resolution 2.70 Å

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	T	G	A	R	P	F	V	C	K	V	C	G	K	G	F	R	Q	A	S	T	L	C	R	H	K	I	I	H	T	Q	E	K	P	H	K	C	N	Q	C	G	K	A	F	N	R	S	S	T	L	N	T	H	T	R	I	H	A	G	Y	K	P	F	V	C	E	F	C	G	K	G	F	H	Q	K	G	N	Y	K
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	S	G	S	K	K	Y	L	S	N	H	K	G	I	F	I	H	V	T	L	E	E	L	K	R	Y	H	Q	L	T	P	E	Q	K	R	L	I	R	A	I	V	K	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	N	P	Q	L	L	D	E	S	S	Y	L
Template Known Secondary structure				T	T			G	G	G	G		S	S															T	T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																							.	.	.	.	.	.	.	.	.	60	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	K	L	T	H	S	G	E	K	Q	F	K	C	N	I	C	N	K	A	F	H	Q	V	Y	N	L	T	F	H	M	H	T	H	N	D	K	K	P	F	T	C	P	T	C	G	K	G	F	C	R	N	F	D	L	K	K	H	V	R	K	L	H	D
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		Y	R	L	L	A	S	K	A	I	S	Q	F	V	C	P	L	C	L	M	P	F	S	S	S	V	S	L	K	Q	H	I	R	Y	T	E	H	T	K	V	.	.	C	P	V	C	K	K	E	F	T	S	T	D	S	A	L	D	H	V	C	K	K	H	N
Template Known Secondary structure												S				T	T	T					S	S											T					B	.	.		T	T	T			B		S	S											T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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