Job Description A0PJY2 Confidence 94.07% Date Fri May 25 09:29:34 BST 2012 Rank 177 Aligned Residues 51 % Identity 29% Template c2eodA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor-associated factor 4; PDBTitle: solution structure of traf-type zinc finger domains (190-2 248) from human tnf receptor-associated factor 4 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	E	K	Q	F	K	C	N	I	C	N	K	A	F	H	Q	V	Y	N	L	T	F	H	M	H	T	H	N	D	K	K	P	F	T	C	P	.	T	C	G	K	G	F	C	R	N	F	D	L	K	K	H	V	R
Query Conservation																																						.
Alig confidence																.												.										.
Template Conservation																.												.
Template Sequence		G	K	R	T	Q	P	C	T	Y	C	T	K	E	F	.	V	F	D	T	I	Q	S	H	Q	Y	Q	.	C	P	R	L	P	V	A	C	P	N	Q	C	G	V	G	T	V	A	R	E	D	L	P	G	H	L	K
Template Known Secondary structure									S	S	S					.												.		S	S	S					T	T			S						T	T	T
Template Predicted Secondary structure																.												.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions